Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_01095 and AO353_01100 are separated by 98 nucleotides AO353_01100 and AO353_01105 are separated by 102 nucleotides AO353_01105 and AO353_01110 are separated by 22 nucleotides
AO353_01095: AO353_01095 - hypothetical protein, at 240,868 to 242,709
_01095
AO353_01100: AO353_01100 - lysine transporter LysE, at 242,808 to 243,431
_01100
AO353_01105: AO353_01105 - hypothetical protein, at 243,534 to 243,920
_01105
AO353_01110: AO353_01110 - inducer of phenazine B, at 243,943 to 246,135
_01110
Position (kb) 243
244 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 242.538 kb on + strand at 242.541 kb on + strand at 242.542 kb on - strand at 242.542 kb on - strand at 242.542 kb on - strand at 242.675 kb on + strand at 242.675 kb on + strand at 242.676 kb on - strand at 242.676 kb on - strand at 242.695 kb on + strand at 242.695 kb on + strand at 242.695 kb on + strand at 242.695 kb on + strand at 242.696 kb on - strand at 242.696 kb on - strand at 242.696 kb on - strand at 242.699 kb on + strand at 242.699 kb on + strand at 242.699 kb on + strand at 242.699 kb on + strand at 242.699 kb on + strand at 242.699 kb on + strand at 242.699 kb on + strand at 242.699 kb on + strand at 242.699 kb on + strand at 242.699 kb on + strand at 242.699 kb on + strand at 242.699 kb on + strand at 242.700 kb on - strand at 242.700 kb on - strand at 242.700 kb on - strand at 242.700 kb on - strand at 242.700 kb on - strand at 242.700 kb on - strand at 242.700 kb on - strand at 242.700 kb on - strand at 242.700 kb on - strand at 242.700 kb on - strand at 242.700 kb on - strand at 242.700 kb on - strand at 242.700 kb on - strand at 242.700 kb on - strand at 242.700 kb on - strand at 242.700 kb on - strand at 242.700 kb on - strand at 242.700 kb on - strand at 242.700 kb on - strand at 242.700 kb on - strand at 242.700 kb on - strand at 242.703 kb on + strand at 242.703 kb on + strand at 242.703 kb on + strand at 242.704 kb on - strand at 242.704 kb on - strand at 242.704 kb on - strand at 242.711 kb on + strand at 242.711 kb on + strand at 242.712 kb on - strand at 242.712 kb on - strand at 242.712 kb on - strand at 242.712 kb on - strand at 242.712 kb on - strand at 242.727 kb on + strand at 242.728 kb on - strand at 242.742 kb on - strand at 242.742 kb on - strand at 242.742 kb on - strand at 242.742 kb on - strand at 242.742 kb on - strand at 242.770 kb on + strand at 242.770 kb on + strand at 242.771 kb on - strand at 242.771 kb on - strand at 242.771 kb on - strand at 242.784 kb on + strand at 242.785 kb on - strand at 242.792 kb on - strand at 242.792 kb on - strand at 242.792 kb on - strand at 242.792 kb on - strand at 242.792 kb on - strand at 242.797 kb on + strand at 242.797 kb on + strand at 242.798 kb on - strand at 242.798 kb on - strand at 242.799 kb on + strand at 242.799 kb on + strand at 242.799 kb on + strand at 242.799 kb on + strand at 242.800 kb on - strand at 242.800 kb on - strand at 242.800 kb on - strand at 242.800 kb on - strand at 242.803 kb on + strand at 242.803 kb on + strand at 242.803 kb on + strand at 242.803 kb on + strand at 242.804 kb on - strand at 242.844 kb on + strand at 242.886 kb on - strand, within AO353_01100 at 242.932 kb on + strand, within AO353_01100 at 242.932 kb on + strand, within AO353_01100 at 242.933 kb on - strand, within AO353_01100 at 243.016 kb on + strand, within AO353_01100 at 243.035 kb on + strand, within AO353_01100 at 243.035 kb on + strand, within AO353_01100 at 243.035 kb on + strand, within AO353_01100 at 243.035 kb on + strand, within AO353_01100 at 243.036 kb on - strand, within AO353_01100 at 243.036 kb on - strand, within AO353_01100 at 243.036 kb on - strand, within AO353_01100 at 243.036 kb on - strand, within AO353_01100 at 243.036 kb on - strand, within AO353_01100 at 243.037 kb on + strand, within AO353_01100 at 243.037 kb on + strand, within AO353_01100 at 243.037 kb on + strand, within AO353_01100 at 243.037 kb on + strand, within AO353_01100 at 243.037 kb on + strand, within AO353_01100 at 243.037 kb on + strand, within AO353_01100 at 243.038 kb on - strand, within AO353_01100 at 243.038 kb on - strand, within AO353_01100 at 243.038 kb on - strand, within AO353_01100 at 243.038 kb on - strand, within AO353_01100 at 243.038 kb on - strand, within AO353_01100 at 243.038 kb on - strand, within AO353_01100 at 243.038 kb on - strand, within AO353_01100 at 243.038 kb on - strand, within AO353_01100 at 243.038 kb on - strand, within AO353_01100 at 243.038 kb on - strand, within AO353_01100 at 243.038 kb on - strand, within AO353_01100 at 243.178 kb on + strand, within AO353_01100 at 243.178 kb on + strand, within AO353_01100 at 243.178 kb on + strand, within AO353_01100 at 243.178 kb on + strand, within AO353_01100 at 243.187 kb on + strand, within AO353_01100 at 243.187 kb on + strand, within AO353_01100 at 243.187 kb on + strand, within AO353_01100 at 243.188 kb on - strand, within AO353_01100 at 243.188 kb on - strand, within AO353_01100 at 243.188 kb on - strand, within AO353_01100 at 243.210 kb on + strand, within AO353_01100 at 243.210 kb on + strand, within AO353_01100 at 243.210 kb on + strand, within AO353_01100 at 243.210 kb on + strand, within AO353_01100 at 243.210 kb on + strand, within AO353_01100 at 243.210 kb on + strand, within AO353_01100 at 243.210 kb on + strand, within AO353_01100 at 243.210 kb on + strand, within AO353_01100 at 243.211 kb on - strand, within AO353_01100 at 243.211 kb on - strand, within AO353_01100 at 243.211 kb on - strand, within AO353_01100 at 243.211 kb on - strand, within AO353_01100 at 243.211 kb on - strand, within AO353_01100 at 243.211 kb on - strand, within AO353_01100 at 243.211 kb on - strand, within AO353_01100 at 243.211 kb on - strand, within AO353_01100 at 243.211 kb on - strand, within AO353_01100 at 243.211 kb on - strand, within AO353_01100 at 243.229 kb on + strand, within AO353_01100 at 243.412 kb on + strand at 243.412 kb on + strand at 243.412 kb on + strand at 243.412 kb on + strand at 243.412 kb on + strand at 243.413 kb on - strand at 243.415 kb on + strand at 243.415 kb on + strand at 243.415 kb on + strand at 243.415 kb on + strand at 243.416 kb on - strand at 243.452 kb on + strand at 243.516 kb on + strand at 243.517 kb on - strand at 243.517 kb on - strand at 243.517 kb on - strand at 243.625 kb on + strand, within AO353_01105 at 243.625 kb on + strand, within AO353_01105 at 243.685 kb on + strand, within AO353_01105 at 243.685 kb on + strand, within AO353_01105 at 243.685 kb on + strand, within AO353_01105 at 243.724 kb on + strand, within AO353_01105 at 243.731 kb on + strand, within AO353_01105 at 243.807 kb on - strand, within AO353_01105 at 243.807 kb on - strand, within AO353_01105 at 243.808 kb on + strand, within AO353_01105 at 243.808 kb on + strand, within AO353_01105 at 243.808 kb on + strand, within AO353_01105 at 243.808 kb on + strand, within AO353_01105 at 243.809 kb on - strand, within AO353_01105 at 243.809 kb on - strand, within AO353_01105 at 243.809 kb on - strand, within AO353_01105 at 243.822 kb on + strand, within AO353_01105 at 243.823 kb on - strand, within AO353_01105 at 243.823 kb on - strand, within AO353_01105 at 243.924 kb on + strand at 243.924 kb on + strand at 243.924 kb on + strand at 243.924 kb on + strand at 243.924 kb on + strand at 243.924 kb on + strand at 243.924 kb on + strand at 243.924 kb on + strand at 243.924 kb on + strand at 243.925 kb on - strand at 243.925 kb on - strand at 243.925 kb on - strand at 243.925 kb on - strand at 243.925 kb on - strand at 243.925 kb on - strand at 243.925 kb on - strand at 243.925 kb on - strand at 243.925 kb on - strand at 243.925 kb on - strand at 243.925 kb on - strand at 243.941 kb on + strand at 244.178 kb on + strand, within AO353_01110 at 244.178 kb on + strand, within AO353_01110 at 244.178 kb on + strand, within AO353_01110 at 244.178 kb on + strand, within AO353_01110 at 244.178 kb on + strand, within AO353_01110 at 244.302 kb on - strand, within AO353_01110 at 244.322 kb on - strand, within AO353_01110 at 244.359 kb on + strand, within AO353_01110 at 244.360 kb on - strand, within AO353_01110 at 244.360 kb on - strand, within AO353_01110 at 244.394 kb on + strand, within AO353_01110 at 244.394 kb on + strand, within AO353_01110 at 244.394 kb on + strand at 244.395 kb on - strand, within AO353_01110 at 244.395 kb on - strand, within AO353_01110 at 244.499 kb on + strand, within AO353_01110 at 244.523 kb on + strand, within AO353_01110 at 244.551 kb on - strand, within AO353_01110 at 244.569 kb on - strand, within AO353_01110 at 244.569 kb on - strand, within AO353_01110 at 244.569 kb on - strand, within AO353_01110 at 244.651 kb on + strand, within AO353_01110 at 244.651 kb on + strand, within AO353_01110 at 244.651 kb on + strand, within AO353_01110 at 244.652 kb on - strand, within AO353_01110 at 244.652 kb on - strand, within AO353_01110 at 244.773 kb on - strand, within AO353_01110 at 244.773 kb on - strand, within AO353_01110 at 244.838 kb on + strand at 244.838 kb on + strand, within AO353_01110 at 244.838 kb on + strand, within AO353_01110 at 244.838 kb on + strand, within AO353_01110 at 244.838 kb on + strand, within AO353_01110 at 244.839 kb on - strand, within AO353_01110 at 244.839 kb on - strand, within AO353_01110 at 244.890 kb on + strand, within AO353_01110 at 244.890 kb on + strand, within AO353_01110 at 244.890 kb on + strand, within AO353_01110 at 244.891 kb on - strand, within AO353_01110 at 244.895 kb on + strand, within AO353_01110 at 244.895 kb on + strand, within AO353_01110 at 244.896 kb on - strand, within AO353_01110 at 244.896 kb on - strand, within AO353_01110
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 242,538 + +1.9 242,541 + -2.0 242,542 - +1.5 242,542 - -1.5 242,542 - +0.5 242,675 + +2.0 242,675 + +0.6 242,676 - +1.1 242,676 - -1.5 242,695 + -0.3 242,695 + +1.5 242,695 + +1.0 242,695 + -0.8 242,696 - +0.6 242,696 - -2.2 242,696 - -0.5 242,699 + -0.5 242,699 + +1.3 242,699 + +1.5 242,699 + +2.2 242,699 + -0.1 242,699 + +2.1 242,699 + -0.7 242,699 + +2.1 242,699 + +1.9 242,699 + +0.6 242,699 + +0.9 242,699 + -1.5 242,700 - -2.2 242,700 - +0.1 242,700 - +1.9 242,700 - -0.1 242,700 - -2.6 242,700 - -0.2 242,700 - +0.8 242,700 - +0.4 242,700 - +0.8 242,700 - +1.6 242,700 - +0.9 242,700 - +0.3 242,700 - +1.5 242,700 - -1.7 242,700 - +0.8 242,700 - -1.5 242,700 - -0.1 242,700 - -2.1 242,700 - +0.1 242,700 - +1.5 242,700 - +1.1 242,703 + -2.5 242,703 + +2.2 242,703 + +1.6 242,704 - +0.6 242,704 - +0.2 242,704 - +0.9 242,711 + -2.0 242,711 + -0.3 242,712 - -1.5 242,712 - -1.1 242,712 - +1.4 242,712 - -2.1 242,712 - -2.4 242,727 + +1.7 242,728 - -1.7 242,742 - +2.3 242,742 - +1.1 242,742 - -0.6 242,742 - +0.8 242,742 - +0.6 242,770 + -0.1 242,770 + -1.0 242,771 - +1.0 242,771 - -0.4 242,771 - -0.7 242,784 + +0.4 242,785 - -0.5 242,792 - -0.8 242,792 - -2.1 242,792 - -1.4 242,792 - +0.9 242,792 - -0.1 242,797 + +1.0 242,797 + -1.1 242,798 - +0.3 242,798 - -0.2 242,799 + +1.4 242,799 + +2.2 242,799 + -0.3 242,799 + +1.2 242,800 - +2.1 242,800 - -0.6 242,800 - +2.9 242,800 - -2.3 242,803 + +0.8 242,803 + +1.6 242,803 + +0.8 242,803 + -1.5 242,804 - +2.2 242,844 + -1.3 242,886 - AO353_01100 0.12 -1.4 242,932 + AO353_01100 0.20 +0.7 242,932 + AO353_01100 0.20 -0.9 242,933 - AO353_01100 0.20 -1.1 243,016 + AO353_01100 0.33 -0.1 243,035 + AO353_01100 0.36 -0.1 243,035 + AO353_01100 0.36 +0.6 243,035 + AO353_01100 0.36 +2.1 243,035 + AO353_01100 0.36 -0.5 243,036 - AO353_01100 0.37 -1.5 243,036 - AO353_01100 0.37 -0.5 243,036 - AO353_01100 0.37 +0.0 243,036 - AO353_01100 0.37 +0.5 243,036 - AO353_01100 0.37 +1.3 243,037 + AO353_01100 0.37 -1.1 243,037 + AO353_01100 0.37 +1.3 243,037 + AO353_01100 0.37 -2.0 243,037 + AO353_01100 0.37 -1.7 243,037 + AO353_01100 0.37 +1.8 243,037 + AO353_01100 0.37 +1.2 243,038 - AO353_01100 0.37 +1.8 243,038 - AO353_01100 0.37 -0.3 243,038 - AO353_01100 0.37 -1.1 243,038 - AO353_01100 0.37 +1.6 243,038 - AO353_01100 0.37 -0.8 243,038 - AO353_01100 0.37 -0.1 243,038 - AO353_01100 0.37 +0.2 243,038 - AO353_01100 0.37 -1.4 243,038 - AO353_01100 0.37 +1.0 243,038 - AO353_01100 0.37 -1.1 243,038 - AO353_01100 0.37 -0.6 243,178 + AO353_01100 0.59 +1.7 243,178 + AO353_01100 0.59 +0.5 243,178 + AO353_01100 0.59 -0.5 243,178 + AO353_01100 0.59 -0.1 243,187 + AO353_01100 0.61 -1.1 243,187 + AO353_01100 0.61 +0.4 243,187 + AO353_01100 0.61 +1.4 243,188 - AO353_01100 0.61 +0.5 243,188 - AO353_01100 0.61 -3.2 243,188 - AO353_01100 0.61 +1.9 243,210 + AO353_01100 0.64 +1.5 243,210 + AO353_01100 0.64 +0.9 243,210 + AO353_01100 0.64 +1.0 243,210 + AO353_01100 0.64 -0.6 243,210 + AO353_01100 0.64 -1.9 243,210 + AO353_01100 0.64 +0.7 243,210 + AO353_01100 0.64 +0.3 243,210 + AO353_01100 0.64 -3.1 243,211 - AO353_01100 0.65 +0.8 243,211 - AO353_01100 0.65 -1.1 243,211 - AO353_01100 0.65 +2.7 243,211 - AO353_01100 0.65 -1.5 243,211 - AO353_01100 0.65 -1.4 243,211 - AO353_01100 0.65 +1.5 243,211 - AO353_01100 0.65 -0.5 243,211 - AO353_01100 0.65 -0.2 243,211 - AO353_01100 0.65 -2.6 243,211 - AO353_01100 0.65 -0.8 243,229 + AO353_01100 0.67 -1.1 243,412 + +1.7 243,412 + +0.2 243,412 + +1.2 243,412 + -0.6 243,412 + +0.9 243,413 - -0.7 243,415 + +0.5 243,415 + +0.0 243,415 + -1.6 243,415 + -1.2 243,416 - -2.0 243,452 + +0.4 243,516 + -0.3 243,517 - -0.7 243,517 - +1.5 243,517 - +1.4 243,625 + AO353_01105 0.24 +1.4 243,625 + AO353_01105 0.24 +1.0 243,685 + AO353_01105 0.39 +1.3 243,685 + AO353_01105 0.39 -2.0 243,685 + AO353_01105 0.39 -0.5 243,724 + AO353_01105 0.49 +2.0 243,731 + AO353_01105 0.51 -1.3 243,807 - AO353_01105 0.71 -0.8 243,807 - AO353_01105 0.71 -2.0 243,808 + AO353_01105 0.71 +3.0 243,808 + AO353_01105 0.71 -0.8 243,808 + AO353_01105 0.71 +1.8 243,808 + AO353_01105 0.71 +1.5 243,809 - AO353_01105 0.71 +2.0 243,809 - AO353_01105 0.71 -0.3 243,809 - AO353_01105 0.71 -0.6 243,822 + AO353_01105 0.74 +0.4 243,823 - AO353_01105 0.75 +1.1 243,823 - AO353_01105 0.75 +1.5 243,924 + +1.1 243,924 + -2.1 243,924 + -1.1 243,924 + +0.9 243,924 + +2.6 243,924 + -2.3 243,924 + +1.1 243,924 + -1.3 243,924 + +0.1 243,925 - -0.3 243,925 - +1.8 243,925 - +1.1 243,925 - +1.1 243,925 - +1.6 243,925 - -0.8 243,925 - -1.1 243,925 - +1.3 243,925 - -3.1 243,925 - -1.5 243,925 - -1.6 243,941 + +0.4 244,178 + AO353_01110 0.11 +1.5 244,178 + AO353_01110 0.11 +0.6 244,178 + AO353_01110 0.11 -1.5 244,178 + AO353_01110 0.11 +1.3 244,178 + AO353_01110 0.11 +1.7 244,302 - AO353_01110 0.16 +0.2 244,322 - AO353_01110 0.17 -0.5 244,359 + AO353_01110 0.19 +0.5 244,360 - AO353_01110 0.19 -0.6 244,360 - AO353_01110 0.19 -0.2 244,394 + AO353_01110 0.21 +1.2 244,394 + AO353_01110 0.21 +1.2 244,394 + -0.7 244,395 - AO353_01110 0.21 -1.5 244,395 - AO353_01110 0.21 -1.0 244,499 + AO353_01110 0.25 +1.9 244,523 + AO353_01110 0.26 +1.5 244,551 - AO353_01110 0.28 -0.7 244,569 - AO353_01110 0.29 -1.5 244,569 - AO353_01110 0.29 -0.5 244,569 - AO353_01110 0.29 +1.7 244,651 + AO353_01110 0.32 +1.2 244,651 + AO353_01110 0.32 +0.9 244,651 + AO353_01110 0.32 -0.5 244,652 - AO353_01110 0.32 +1.3 244,652 - AO353_01110 0.32 -1.1 244,773 - AO353_01110 0.38 +1.8 244,773 - AO353_01110 0.38 +2.0 244,838 + +0.5 244,838 + AO353_01110 0.41 -2.2 244,838 + AO353_01110 0.41 -1.5 244,838 + AO353_01110 0.41 +1.2 244,838 + AO353_01110 0.41 -0.8 244,839 - AO353_01110 0.41 -2.2 244,839 - AO353_01110 0.41 -0.5 244,890 + AO353_01110 0.43 -1.1 244,890 + AO353_01110 0.43 -1.6 244,890 + AO353_01110 0.43 +1.0 244,891 - AO353_01110 0.43 +0.8 244,895 + AO353_01110 0.43 +0.3 244,895 + AO353_01110 0.43 -0.5 244,896 - AO353_01110 0.43 +0.9 244,896 - AO353_01110 0.43 -1.2
Or see this region's nucleotide sequence