Experiment: L-Citrulline
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_07315 and AO353_07320 are separated by 118 nucleotides AO353_07320 and AO353_07325 overlap by 1 nucleotides AO353_07325 and AO353_07330 are separated by 33 nucleotides AO353_07330 and AO353_07335 are separated by 287 nucleotides
AO353_07315: AO353_07315 - rRNA methyltransferase, at 1,607,777 to 1,608,595
_07315
AO353_07320: AO353_07320 - magnesium transporter ApaG, at 1,608,714 to 1,609,094
_07320
AO353_07325: AO353_07325 - diadenosine tetraphosphatase, at 1,609,094 to 1,609,975
_07325
AO353_07330: AO353_07330 - sulfurtransferase, at 1,610,009 to 1,610,338
_07330
AO353_07335: AO353_07335 - yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) , at 1,610,626 to 1,612,548
_07335
Position (kb)
1609
1610 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 1608.113 kb on + strand, within AO353_07315 at 1608.113 kb on + strand, within AO353_07315 at 1608.113 kb on + strand, within AO353_07315 at 1608.113 kb on + strand, within AO353_07315 at 1608.113 kb on + strand, within AO353_07315 at 1608.263 kb on + strand, within AO353_07315 at 1608.617 kb on + strand at 1608.643 kb on + strand at 1608.643 kb on + strand at 1608.643 kb on + strand at 1608.643 kb on + strand at 1608.643 kb on + strand at 1608.643 kb on + strand at 1608.644 kb on - strand at 1608.644 kb on - strand at 1608.644 kb on - strand at 1608.644 kb on - strand at 1608.647 kb on - strand at 1608.662 kb on + strand at 1608.662 kb on + strand at 1608.662 kb on + strand at 1608.681 kb on + strand at 1608.682 kb on - strand at 1608.682 kb on - strand at 1608.682 kb on - strand at 1608.701 kb on + strand at 1608.701 kb on + strand at 1608.702 kb on - strand at 1608.807 kb on + strand, within AO353_07320 at 1608.807 kb on + strand, within AO353_07320 at 1608.807 kb on + strand, within AO353_07320 at 1608.807 kb on + strand, within AO353_07320 at 1608.807 kb on + strand, within AO353_07320 at 1608.808 kb on - strand, within AO353_07320 at 1608.808 kb on - strand, within AO353_07320 at 1608.808 kb on - strand, within AO353_07320 at 1608.808 kb on - strand, within AO353_07320 at 1608.808 kb on - strand, within AO353_07320 at 1608.808 kb on - strand, within AO353_07320 at 1608.820 kb on + strand, within AO353_07320 at 1608.820 kb on + strand, within AO353_07320 at 1608.820 kb on + strand, within AO353_07320 at 1608.820 kb on + strand, within AO353_07320 at 1608.820 kb on + strand, within AO353_07320 at 1608.820 kb on + strand, within AO353_07320 at 1608.820 kb on + strand, within AO353_07320 at 1608.820 kb on + strand, within AO353_07320 at 1608.820 kb on + strand, within AO353_07320 at 1608.820 kb on + strand, within AO353_07320 at 1608.820 kb on + strand, within AO353_07320 at 1608.821 kb on - strand, within AO353_07320 at 1608.821 kb on - strand, within AO353_07320 at 1608.821 kb on - strand, within AO353_07320 at 1608.821 kb on - strand, within AO353_07320 at 1608.821 kb on - strand, within AO353_07320 at 1608.821 kb on - strand, within AO353_07320 at 1608.821 kb on - strand, within AO353_07320 at 1608.821 kb on - strand, within AO353_07320 at 1608.821 kb on - strand, within AO353_07320 at 1608.821 kb on - strand, within AO353_07320 at 1608.824 kb on + strand, within AO353_07320 at 1608.824 kb on + strand, within AO353_07320 at 1608.824 kb on + strand, within AO353_07320 at 1608.824 kb on + strand, within AO353_07320 at 1608.824 kb on + strand, within AO353_07320 at 1608.824 kb on + strand, within AO353_07320 at 1608.824 kb on + strand, within AO353_07320 at 1608.824 kb on + strand, within AO353_07320 at 1608.824 kb on + strand, within AO353_07320 at 1608.824 kb on + strand, within AO353_07320 at 1608.824 kb on + strand, within AO353_07320 at 1608.824 kb on + strand, within AO353_07320 at 1608.825 kb on - strand, within AO353_07320 at 1608.825 kb on - strand, within AO353_07320 at 1608.825 kb on - strand, within AO353_07320 at 1608.825 kb on - strand, within AO353_07320 at 1608.825 kb on - strand, within AO353_07320 at 1608.825 kb on - strand, within AO353_07320 at 1608.825 kb on - strand, within AO353_07320 at 1608.825 kb on - strand, within AO353_07320 at 1608.825 kb on - strand, within AO353_07320 at 1608.825 kb on - strand, within AO353_07320 at 1608.825 kb on - strand, within AO353_07320 at 1608.825 kb on - strand, within AO353_07320 at 1608.868 kb on + strand, within AO353_07320 at 1608.868 kb on + strand, within AO353_07320 at 1608.868 kb on + strand, within AO353_07320 at 1608.869 kb on - strand, within AO353_07320 at 1608.869 kb on - strand, within AO353_07320 at 1608.869 kb on - strand, within AO353_07320 at 1608.869 kb on - strand, within AO353_07320 at 1608.869 kb on - strand, within AO353_07320 at 1608.873 kb on - strand, within AO353_07320 at 1608.873 kb on - strand, within AO353_07320 at 1608.960 kb on + strand, within AO353_07320 at 1608.960 kb on + strand, within AO353_07320 at 1608.960 kb on + strand, within AO353_07320 at 1608.960 kb on + strand, within AO353_07320 at 1608.960 kb on + strand, within AO353_07320 at 1608.960 kb on + strand, within AO353_07320 at 1608.960 kb on + strand, within AO353_07320 at 1608.960 kb on + strand, within AO353_07320 at 1608.960 kb on + strand, within AO353_07320 at 1608.960 kb on + strand, within AO353_07320 at 1608.961 kb on - strand, within AO353_07320 at 1608.961 kb on - strand, within AO353_07320 at 1608.961 kb on - strand, within AO353_07320 at 1608.961 kb on - strand, within AO353_07320 at 1608.961 kb on - strand, within AO353_07320 at 1608.961 kb on - strand, within AO353_07320 at 1608.961 kb on - strand, within AO353_07320 at 1608.961 kb on - strand, within AO353_07320 at 1608.961 kb on - strand, within AO353_07320 at 1609.011 kb on + strand, within AO353_07320 at 1609.011 kb on + strand, within AO353_07320 at 1609.011 kb on + strand, within AO353_07320 at 1609.011 kb on + strand, within AO353_07320 at 1609.012 kb on - strand, within AO353_07320 at 1609.012 kb on - strand, within AO353_07320 at 1609.012 kb on - strand, within AO353_07320 at 1609.012 kb on - strand, within AO353_07320 at 1609.034 kb on + strand, within AO353_07320 at 1609.251 kb on - strand, within AO353_07325 at 1609.522 kb on - strand, within AO353_07325 at 1609.522 kb on - strand, within AO353_07325 at 1609.563 kb on - strand, within AO353_07325 at 1609.671 kb on + strand, within AO353_07325 at 1609.925 kb on + strand at 1609.925 kb on + strand at 1609.925 kb on + strand at 1609.925 kb on + strand at 1609.926 kb on - strand at 1609.926 kb on - strand at 1609.926 kb on - strand at 1609.926 kb on - strand at 1609.926 kb on - strand at 1609.926 kb on - strand at 1609.950 kb on + strand at 1609.950 kb on + strand at 1609.950 kb on + strand at 1609.950 kb on + strand at 1609.950 kb on + strand at 1609.950 kb on + strand at 1609.950 kb on + strand at 1609.950 kb on + strand at 1609.950 kb on + strand at 1609.951 kb on - strand at 1609.951 kb on - strand at 1609.951 kb on - strand at 1609.951 kb on - strand at 1609.951 kb on - strand at 1609.951 kb on - strand at 1609.951 kb on - strand at 1609.951 kb on - strand at 1609.951 kb on - strand at 1609.974 kb on - strand at 1610.190 kb on + strand, within AO353_07330 at 1610.191 kb on - strand, within AO353_07330 at 1610.201 kb on + strand, within AO353_07330 at 1610.202 kb on - strand, within AO353_07330 at 1610.234 kb on + strand, within AO353_07330 at 1610.234 kb on + strand, within AO353_07330 at 1610.234 kb on + strand, within AO353_07330 at 1610.234 kb on + strand, within AO353_07330 at 1610.234 kb on + strand, within AO353_07330 at 1610.235 kb on - strand, within AO353_07330 at 1610.235 kb on - strand, within AO353_07330 at 1610.235 kb on - strand, within AO353_07330 at 1610.235 kb on - strand, within AO353_07330 at 1610.235 kb on - strand, within AO353_07330 at 1610.235 kb on - strand, within AO353_07330 at 1610.235 kb on - strand, within AO353_07330 at 1610.264 kb on + strand, within AO353_07330 at 1610.264 kb on + strand, within AO353_07330 at 1610.264 kb on + strand, within AO353_07330 at 1610.265 kb on - strand, within AO353_07330 at 1610.265 kb on - strand, within AO353_07330 at 1610.265 kb on - strand, within AO353_07330 at 1610.265 kb on - strand, within AO353_07330 at 1610.265 kb on - strand, within AO353_07330 at 1610.265 kb on - strand, within AO353_07330 at 1610.265 kb on - strand, within AO353_07330 at 1610.265 kb on - strand, within AO353_07330 at 1610.265 kb on - strand, within AO353_07330 at 1610.265 kb on - strand, within AO353_07330 at 1610.303 kb on + strand, within AO353_07330 at 1610.304 kb on - strand, within AO353_07330 at 1610.386 kb on + strand at 1610.393 kb on - strand at 1610.393 kb on - strand at 1610.401 kb on + strand at 1610.401 kb on + strand at 1610.402 kb on - strand at 1610.409 kb on - strand at 1610.417 kb on + strand at 1610.418 kb on - strand at 1610.418 kb on - strand at 1610.436 kb on + strand at 1610.436 kb on + strand at 1610.436 kb on + strand at 1610.436 kb on + strand at 1610.436 kb on + strand at 1610.436 kb on + strand at 1610.437 kb on - strand at 1610.437 kb on - strand at 1610.437 kb on - strand at 1610.437 kb on - strand at 1610.437 kb on - strand at 1610.443 kb on - strand at 1610.502 kb on + strand at 1610.502 kb on + strand at 1610.503 kb on - strand at 1610.503 kb on - strand at 1610.503 kb on - strand at 1610.503 kb on - strand at 1610.518 kb on + strand at 1610.519 kb on - strand at 1610.519 kb on - strand at 1610.542 kb on + strand at 1610.608 kb on - strand at 1610.631 kb on + strand at 1610.631 kb on + strand at 1610.631 kb on + strand at 1610.632 kb on - strand at 1610.632 kb on - strand at 1610.632 kb on - strand at 1610.632 kb on - strand at 1610.632 kb on - strand at 1610.695 kb on + strand at 1610.696 kb on - strand at 1610.696 kb on - strand at 1610.750 kb on + strand at 1610.896 kb on + strand, within AO353_07335 at 1610.896 kb on + strand, within AO353_07335 at 1610.897 kb on - strand, within AO353_07335 at 1610.897 kb on - strand, within AO353_07335 at 1610.897 kb on - strand, within AO353_07335 at 1610.897 kb on - strand, within AO353_07335 at 1610.944 kb on + strand, within AO353_07335 at 1610.944 kb on + strand, within AO353_07335 at 1610.944 kb on + strand, within AO353_07335 at 1610.944 kb on + strand, within AO353_07335 at 1610.945 kb on - strand, within AO353_07335 at 1610.945 kb on - strand, within AO353_07335 at 1610.970 kb on + strand, within AO353_07335 at 1610.971 kb on - strand, within AO353_07335 at 1610.971 kb on - strand, within AO353_07335
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline remove 1,608,113 + AO353_07315 0.41 +0.9 1,608,113 + AO353_07315 0.41 -1.6 1,608,113 + AO353_07315 0.41 +1.9 1,608,113 + AO353_07315 0.41 -1.8 1,608,113 + AO353_07315 0.41 +0.5 1,608,263 + AO353_07315 0.59 -0.1 1,608,617 + -0.7 1,608,643 + -1.7 1,608,643 + -1.4 1,608,643 + -1.8 1,608,643 + -3.1 1,608,643 + +0.3 1,608,643 + +0.0 1,608,644 - +0.3 1,608,644 - +0.5 1,608,644 - -0.1 1,608,644 - +0.2 1,608,647 - +0.3 1,608,662 + +1.2 1,608,662 + -2.7 1,608,662 + +1.4 1,608,681 + +2.9 1,608,682 - -1.6 1,608,682 - -0.5 1,608,682 - +1.4 1,608,701 + -0.4 1,608,701 + -2.5 1,608,702 - -0.9 1,608,807 + AO353_07320 0.24 +0.1 1,608,807 + AO353_07320 0.24 -0.9 1,608,807 + AO353_07320 0.24 +0.3 1,608,807 + AO353_07320 0.24 +0.5 1,608,807 + AO353_07320 0.24 -0.6 1,608,808 - AO353_07320 0.25 -0.1 1,608,808 - AO353_07320 0.25 +1.2 1,608,808 - AO353_07320 0.25 -1.1 1,608,808 - AO353_07320 0.25 -2.1 1,608,808 - AO353_07320 0.25 -2.0 1,608,808 - AO353_07320 0.25 +0.3 1,608,820 + AO353_07320 0.28 -0.6 1,608,820 + AO353_07320 0.28 +1.2 1,608,820 + AO353_07320 0.28 +0.3 1,608,820 + AO353_07320 0.28 +0.3 1,608,820 + AO353_07320 0.28 +1.4 1,608,820 + AO353_07320 0.28 -3.0 1,608,820 + AO353_07320 0.28 +0.0 1,608,820 + AO353_07320 0.28 -0.7 1,608,820 + AO353_07320 0.28 -1.1 1,608,820 + AO353_07320 0.28 -0.4 1,608,820 + AO353_07320 0.28 -1.3 1,608,821 - AO353_07320 0.28 +0.2 1,608,821 - AO353_07320 0.28 +0.3 1,608,821 - AO353_07320 0.28 +0.2 1,608,821 - AO353_07320 0.28 -0.7 1,608,821 - AO353_07320 0.28 -0.9 1,608,821 - AO353_07320 0.28 -1.1 1,608,821 - AO353_07320 0.28 -1.1 1,608,821 - AO353_07320 0.28 -0.6 1,608,821 - AO353_07320 0.28 +0.7 1,608,821 - AO353_07320 0.28 -2.8 1,608,824 + AO353_07320 0.29 -1.5 1,608,824 + AO353_07320 0.29 +2.0 1,608,824 + AO353_07320 0.29 -1.7 1,608,824 + AO353_07320 0.29 +0.3 1,608,824 + AO353_07320 0.29 -1.8 1,608,824 + AO353_07320 0.29 -2.4 1,608,824 + AO353_07320 0.29 -1.6 1,608,824 + AO353_07320 0.29 +0.3 1,608,824 + AO353_07320 0.29 -0.4 1,608,824 + AO353_07320 0.29 +0.7 1,608,824 + AO353_07320 0.29 -2.0 1,608,824 + AO353_07320 0.29 -1.4 1,608,825 - AO353_07320 0.29 +2.9 1,608,825 - AO353_07320 0.29 +1.9 1,608,825 - AO353_07320 0.29 -1.9 1,608,825 - AO353_07320 0.29 -2.6 1,608,825 - AO353_07320 0.29 -2.0 1,608,825 - AO353_07320 0.29 -0.9 1,608,825 - AO353_07320 0.29 +0.0 1,608,825 - AO353_07320 0.29 +2.3 1,608,825 - AO353_07320 0.29 +1.7 1,608,825 - AO353_07320 0.29 -0.8 1,608,825 - AO353_07320 0.29 -0.4 1,608,825 - AO353_07320 0.29 +1.2 1,608,868 + AO353_07320 0.40 +1.9 1,608,868 + AO353_07320 0.40 +0.7 1,608,868 + AO353_07320 0.40 -3.1 1,608,869 - AO353_07320 0.41 -0.7 1,608,869 - AO353_07320 0.41 -1.1 1,608,869 - AO353_07320 0.41 -0.1 1,608,869 - AO353_07320 0.41 -1.6 1,608,869 - AO353_07320 0.41 -2.4 1,608,873 - AO353_07320 0.42 -1.4 1,608,873 - AO353_07320 0.42 -1.4 1,608,960 + AO353_07320 0.65 -0.7 1,608,960 + AO353_07320 0.65 -1.5 1,608,960 + AO353_07320 0.65 +0.9 1,608,960 + AO353_07320 0.65 -0.6 1,608,960 + AO353_07320 0.65 -0.3 1,608,960 + AO353_07320 0.65 +1.2 1,608,960 + AO353_07320 0.65 +0.7 1,608,960 + AO353_07320 0.65 -0.9 1,608,960 + AO353_07320 0.65 -1.6 1,608,960 + AO353_07320 0.65 +3.2 1,608,961 - AO353_07320 0.65 -1.8 1,608,961 - AO353_07320 0.65 -1.4 1,608,961 - AO353_07320 0.65 +0.9 1,608,961 - AO353_07320 0.65 -1.4 1,608,961 - AO353_07320 0.65 +0.6 1,608,961 - AO353_07320 0.65 +0.3 1,608,961 - AO353_07320 0.65 +1.0 1,608,961 - AO353_07320 0.65 +1.4 1,608,961 - AO353_07320 0.65 -0.3 1,609,011 + AO353_07320 0.78 +3.8 1,609,011 + AO353_07320 0.78 +0.9 1,609,011 + AO353_07320 0.78 -0.9 1,609,011 + AO353_07320 0.78 -0.2 1,609,012 - AO353_07320 0.78 -0.1 1,609,012 - AO353_07320 0.78 -0.6 1,609,012 - AO353_07320 0.78 -0.2 1,609,012 - AO353_07320 0.78 +2.6 1,609,034 + AO353_07320 0.84 -0.4 1,609,251 - AO353_07325 0.18 -0.4 1,609,522 - AO353_07325 0.49 +1.9 1,609,522 - AO353_07325 0.49 +4.7 1,609,563 - AO353_07325 0.53 +1.5 1,609,671 + AO353_07325 0.65 +1.9 1,609,925 + -1.4 1,609,925 + -1.7 1,609,925 + -1.4 1,609,925 + -1.7 1,609,926 - +0.8 1,609,926 - +1.6 1,609,926 - +0.5 1,609,926 - -0.7 1,609,926 - -1.1 1,609,926 - -0.9 1,609,950 + -0.3 1,609,950 + +1.0 1,609,950 + -1.4 1,609,950 + -1.0 1,609,950 + -0.4 1,609,950 + +2.6 1,609,950 + +1.0 1,609,950 + +0.1 1,609,950 + -0.2 1,609,951 - +0.7 1,609,951 - -1.3 1,609,951 - +0.9 1,609,951 - -1.1 1,609,951 - -2.2 1,609,951 - +0.2 1,609,951 - -2.4 1,609,951 - +0.1 1,609,951 - +0.9 1,609,974 - +0.9 1,610,190 + AO353_07330 0.55 +0.1 1,610,191 - AO353_07330 0.55 -0.1 1,610,201 + AO353_07330 0.58 +0.8 1,610,202 - AO353_07330 0.58 -1.0 1,610,234 + AO353_07330 0.68 +1.4 1,610,234 + AO353_07330 0.68 -0.1 1,610,234 + AO353_07330 0.68 +1.7 1,610,234 + AO353_07330 0.68 -1.3 1,610,234 + AO353_07330 0.68 -0.9 1,610,235 - AO353_07330 0.68 -3.5 1,610,235 - AO353_07330 0.68 -1.6 1,610,235 - AO353_07330 0.68 +0.1 1,610,235 - AO353_07330 0.68 -1.1 1,610,235 - AO353_07330 0.68 +1.2 1,610,235 - AO353_07330 0.68 -0.5 1,610,235 - AO353_07330 0.68 -0.6 1,610,264 + AO353_07330 0.77 +1.5 1,610,264 + AO353_07330 0.77 +0.2 1,610,264 + AO353_07330 0.77 +1.4 1,610,265 - AO353_07330 0.78 +1.9 1,610,265 - AO353_07330 0.78 -0.4 1,610,265 - AO353_07330 0.78 +0.3 1,610,265 - AO353_07330 0.78 +1.6 1,610,265 - AO353_07330 0.78 +0.0 1,610,265 - AO353_07330 0.78 -2.3 1,610,265 - AO353_07330 0.78 +0.5 1,610,265 - AO353_07330 0.78 -0.4 1,610,265 - AO353_07330 0.78 -0.3 1,610,265 - AO353_07330 0.78 -1.9 1,610,303 + AO353_07330 0.89 -1.1 1,610,304 - AO353_07330 0.89 +2.2 1,610,386 + -1.6 1,610,393 - -2.3 1,610,393 - -2.2 1,610,401 + +1.0 1,610,401 + +0.1 1,610,402 - -1.1 1,610,409 - +0.9 1,610,417 + +4.4 1,610,418 - -0.7 1,610,418 - +0.5 1,610,436 + -1.7 1,610,436 + -0.7 1,610,436 + -0.2 1,610,436 + -0.7 1,610,436 + -0.1 1,610,436 + +0.3 1,610,437 - -1.1 1,610,437 - +3.5 1,610,437 - -0.4 1,610,437 - -2.0 1,610,437 - -2.4 1,610,443 - -0.1 1,610,502 + -1.9 1,610,502 + +1.1 1,610,503 - +1.1 1,610,503 - +0.1 1,610,503 - +0.1 1,610,503 - -0.4 1,610,518 + +0.9 1,610,519 - -0.3 1,610,519 - -1.1 1,610,542 + +1.2 1,610,608 - +1.8 1,610,631 + +0.6 1,610,631 + +0.5 1,610,631 + -1.9 1,610,632 - +1.0 1,610,632 - -2.1 1,610,632 - -2.4 1,610,632 - +0.9 1,610,632 - +2.5 1,610,695 + -0.2 1,610,696 - -0.0 1,610,696 - -1.9 1,610,750 + -0.9 1,610,896 + AO353_07335 0.14 +1.3 1,610,896 + AO353_07335 0.14 +0.4 1,610,897 - AO353_07335 0.14 -1.1 1,610,897 - AO353_07335 0.14 -2.2 1,610,897 - AO353_07335 0.14 +0.3 1,610,897 - AO353_07335 0.14 -3.1 1,610,944 + AO353_07335 0.17 +0.8 1,610,944 + AO353_07335 0.17 +0.3 1,610,944 + AO353_07335 0.17 -0.1 1,610,944 + AO353_07335 0.17 +0.9 1,610,945 - AO353_07335 0.17 +0.4 1,610,945 - AO353_07335 0.17 -1.6 1,610,970 + AO353_07335 0.18 -1.4 1,610,971 - AO353_07335 0.18 -0.0 1,610,971 - AO353_07335 0.18 +0.2
Or see this region's nucleotide sequence