Experiment: L-Citrulline
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_29190 and AO353_29195 are separated by 185 nucleotides AO353_29195 and AO353_29200 are separated by 85 nucleotides
AO353_29190: AO353_29190 - MFS transporter, at 6,340,626 to 6,341,834
_29190
AO353_29195: AO353_29195 - transposase, at 6,342,020 to 6,342,193
_29195
AO353_29200: AO353_29200 - hypothetical protein, at 6,342,279 to 6,342,746
_29200
Position (kb)
6342
6343 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 6341.020 kb on - strand, within AO353_29190 at 6341.020 kb on - strand, within AO353_29190 at 6341.020 kb on - strand, within AO353_29190 at 6341.020 kb on - strand, within AO353_29190 at 6341.020 kb on - strand, within AO353_29190 at 6341.020 kb on - strand, within AO353_29190 at 6341.049 kb on + strand, within AO353_29190 at 6341.050 kb on - strand, within AO353_29190 at 6341.069 kb on - strand, within AO353_29190 at 6341.078 kb on + strand, within AO353_29190 at 6341.078 kb on + strand, within AO353_29190 at 6341.079 kb on - strand, within AO353_29190 at 6341.079 kb on - strand, within AO353_29190 at 6341.079 kb on - strand, within AO353_29190 at 6341.079 kb on - strand, within AO353_29190 at 6341.233 kb on + strand, within AO353_29190 at 6341.233 kb on + strand, within AO353_29190 at 6341.233 kb on + strand, within AO353_29190 at 6341.233 kb on + strand, within AO353_29190 at 6341.233 kb on + strand, within AO353_29190 at 6341.233 kb on + strand, within AO353_29190 at 6341.233 kb on + strand, within AO353_29190 at 6341.234 kb on - strand, within AO353_29190 at 6341.234 kb on - strand, within AO353_29190 at 6341.234 kb on - strand, within AO353_29190 at 6341.234 kb on - strand, within AO353_29190 at 6341.234 kb on - strand, within AO353_29190 at 6341.234 kb on - strand, within AO353_29190 at 6341.234 kb on - strand, within AO353_29190 at 6341.282 kb on - strand, within AO353_29190 at 6341.394 kb on + strand, within AO353_29190 at 6341.395 kb on - strand, within AO353_29190 at 6341.504 kb on - strand, within AO353_29190 at 6341.512 kb on + strand, within AO353_29190 at 6341.602 kb on + strand, within AO353_29190 at 6341.674 kb on + strand, within AO353_29190 at 6341.674 kb on + strand, within AO353_29190 at 6341.727 kb on + strand at 6341.728 kb on - strand at 6341.741 kb on - strand at 6341.795 kb on + strand at 6341.795 kb on + strand at 6341.795 kb on + strand at 6341.796 kb on - strand at 6341.796 kb on - strand at 6341.796 kb on - strand at 6341.823 kb on + strand at 6341.823 kb on + strand at 6341.823 kb on + strand at 6341.832 kb on + strand at 6341.832 kb on + strand at 6341.832 kb on + strand at 6341.832 kb on + strand at 6341.833 kb on - strand at 6341.833 kb on - strand at 6341.833 kb on - strand at 6341.833 kb on - strand at 6341.833 kb on - strand at 6341.851 kb on + strand at 6341.862 kb on + strand at 6341.862 kb on + strand at 6341.863 kb on - strand at 6341.863 kb on - strand at 6341.863 kb on - strand at 6341.887 kb on + strand at 6341.968 kb on + strand at 6341.969 kb on - strand at 6341.969 kb on - strand at 6341.969 kb on - strand at 6342.082 kb on + strand, within AO353_29195 at 6342.082 kb on + strand, within AO353_29195 at 6342.082 kb on + strand, within AO353_29195 at 6342.082 kb on + strand, within AO353_29195 at 6342.101 kb on + strand, within AO353_29195 at 6342.101 kb on + strand, within AO353_29195 at 6342.102 kb on - strand, within AO353_29195 at 6342.107 kb on + strand, within AO353_29195 at 6342.107 kb on + strand, within AO353_29195 at 6342.107 kb on + strand, within AO353_29195 at 6342.107 kb on + strand, within AO353_29195 at 6342.107 kb on + strand, within AO353_29195 at 6342.107 kb on + strand, within AO353_29195 at 6342.108 kb on - strand, within AO353_29195 at 6342.108 kb on - strand, within AO353_29195 at 6342.108 kb on - strand, within AO353_29195 at 6342.108 kb on - strand, within AO353_29195 at 6342.108 kb on - strand, within AO353_29195 at 6342.175 kb on + strand, within AO353_29195 at 6342.175 kb on + strand, within AO353_29195 at 6342.175 kb on + strand, within AO353_29195 at 6342.175 kb on + strand, within AO353_29195 at 6342.175 kb on + strand, within AO353_29195 at 6342.176 kb on - strand at 6342.176 kb on - strand at 6342.176 kb on - strand at 6342.176 kb on - strand at 6342.191 kb on + strand at 6342.191 kb on + strand at 6342.192 kb on - strand at 6342.192 kb on - strand at 6342.227 kb on + strand at 6342.346 kb on + strand, within AO353_29200 at 6342.346 kb on + strand, within AO353_29200 at 6342.346 kb on + strand, within AO353_29200 at 6342.346 kb on + strand, within AO353_29200 at 6342.346 kb on + strand, within AO353_29200 at 6342.347 kb on - strand, within AO353_29200 at 6342.347 kb on - strand, within AO353_29200 at 6342.347 kb on - strand, within AO353_29200 at 6342.483 kb on + strand, within AO353_29200 at 6342.483 kb on + strand, within AO353_29200 at 6342.483 kb on + strand, within AO353_29200 at 6342.483 kb on + strand, within AO353_29200 at 6342.483 kb on + strand, within AO353_29200 at 6342.483 kb on + strand, within AO353_29200 at 6342.484 kb on - strand, within AO353_29200 at 6342.484 kb on - strand, within AO353_29200 at 6342.502 kb on + strand, within AO353_29200 at 6342.520 kb on + strand, within AO353_29200 at 6342.521 kb on - strand, within AO353_29200 at 6342.521 kb on - strand, within AO353_29200 at 6342.521 kb on - strand, within AO353_29200 at 6342.521 kb on - strand, within AO353_29200 at 6342.535 kb on + strand, within AO353_29200 at 6342.535 kb on + strand, within AO353_29200 at 6342.535 kb on + strand, within AO353_29200 at 6342.535 kb on + strand, within AO353_29200 at 6342.535 kb on + strand, within AO353_29200 at 6342.535 kb on + strand, within AO353_29200 at 6342.535 kb on + strand, within AO353_29200 at 6342.535 kb on + strand, within AO353_29200 at 6342.535 kb on + strand, within AO353_29200 at 6342.535 kb on + strand, within AO353_29200 at 6342.536 kb on - strand, within AO353_29200 at 6342.536 kb on - strand, within AO353_29200 at 6342.536 kb on - strand, within AO353_29200 at 6342.548 kb on + strand, within AO353_29200 at 6342.548 kb on + strand, within AO353_29200 at 6342.548 kb on + strand, within AO353_29200 at 6342.548 kb on + strand, within AO353_29200 at 6342.549 kb on - strand, within AO353_29200 at 6342.549 kb on - strand, within AO353_29200 at 6342.549 kb on - strand, within AO353_29200 at 6342.549 kb on - strand, within AO353_29200 at 6342.549 kb on - strand, within AO353_29200 at 6342.549 kb on - strand, within AO353_29200 at 6342.549 kb on - strand, within AO353_29200 at 6342.549 kb on - strand, within AO353_29200 at 6342.652 kb on + strand, within AO353_29200 at 6342.652 kb on + strand, within AO353_29200 at 6342.653 kb on - strand, within AO353_29200 at 6342.675 kb on + strand, within AO353_29200 at 6342.675 kb on + strand, within AO353_29200 at 6342.690 kb on - strand, within AO353_29200 at 6342.693 kb on + strand at 6342.693 kb on + strand, within AO353_29200 at 6342.693 kb on + strand, within AO353_29200 at 6342.693 kb on + strand, within AO353_29200 at 6342.693 kb on + strand, within AO353_29200 at 6342.693 kb on + strand, within AO353_29200 at 6342.693 kb on + strand, within AO353_29200 at 6342.693 kb on + strand, within AO353_29200 at 6342.694 kb on - strand, within AO353_29200 at 6342.694 kb on - strand, within AO353_29200 at 6342.694 kb on - strand, within AO353_29200 at 6342.694 kb on - strand, within AO353_29200 at 6342.694 kb on - strand, within AO353_29200 at 6342.694 kb on - strand, within AO353_29200 at 6342.697 kb on + strand, within AO353_29200 at 6342.697 kb on + strand, within AO353_29200 at 6342.698 kb on - strand, within AO353_29200 at 6342.698 kb on - strand, within AO353_29200 at 6342.698 kb on - strand, within AO353_29200 at 6342.698 kb on - strand, within AO353_29200 at 6342.698 kb on - strand, within AO353_29200 at 6342.790 kb on + strand at 6342.791 kb on - strand at 6342.791 kb on - strand at 6342.791 kb on - strand at 6342.815 kb on - strand at 6342.815 kb on - strand at 6342.815 kb on - strand at 6342.864 kb on - strand at 6342.976 kb on + strand at 6342.976 kb on + strand at 6342.976 kb on + strand at 6342.976 kb on + strand at 6342.976 kb on + strand at 6342.976 kb on + strand at 6342.977 kb on - strand at 6342.977 kb on - strand at 6343.025 kb on - strand at 6343.025 kb on - strand at 6343.061 kb on + strand at 6343.125 kb on - strand at 6343.129 kb on + strand at 6343.129 kb on + strand at 6343.129 kb on + strand at 6343.130 kb on - strand at 6343.137 kb on + strand at 6343.138 kb on - strand at 6343.143 kb on - strand at 6343.143 kb on - strand at 6343.158 kb on + strand at 6343.158 kb on + strand at 6343.159 kb on - strand at 6343.159 kb on - strand at 6343.163 kb on - strand at 6343.171 kb on - strand at 6343.171 kb on - strand at 6343.171 kb on - strand at 6343.173 kb on - strand at 6343.173 kb on - strand at 6343.186 kb on + strand at 6343.187 kb on - strand at 6343.191 kb on + strand at 6343.191 kb on + strand at 6343.192 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline remove 6,341,020 - AO353_29190 0.33 -1.7 6,341,020 - AO353_29190 0.33 -1.5 6,341,020 - AO353_29190 0.33 -0.1 6,341,020 - AO353_29190 0.33 -1.8 6,341,020 - AO353_29190 0.33 +0.1 6,341,020 - AO353_29190 0.33 -0.5 6,341,049 + AO353_29190 0.35 +0.3 6,341,050 - AO353_29190 0.35 -0.3 6,341,069 - AO353_29190 0.37 -1.2 6,341,078 + AO353_29190 0.37 -1.5 6,341,078 + AO353_29190 0.37 +1.4 6,341,079 - AO353_29190 0.37 -0.3 6,341,079 - AO353_29190 0.37 -0.9 6,341,079 - AO353_29190 0.37 -1.3 6,341,079 - AO353_29190 0.37 -0.3 6,341,233 + AO353_29190 0.50 -1.1 6,341,233 + AO353_29190 0.50 -0.1 6,341,233 + AO353_29190 0.50 -0.3 6,341,233 + AO353_29190 0.50 -0.7 6,341,233 + AO353_29190 0.50 -1.3 6,341,233 + AO353_29190 0.50 -1.7 6,341,233 + AO353_29190 0.50 -0.3 6,341,234 - AO353_29190 0.50 -0.5 6,341,234 - AO353_29190 0.50 -0.6 6,341,234 - AO353_29190 0.50 -0.0 6,341,234 - AO353_29190 0.50 -1.5 6,341,234 - AO353_29190 0.50 +0.8 6,341,234 - AO353_29190 0.50 -1.6 6,341,234 - AO353_29190 0.50 +1.0 6,341,282 - AO353_29190 0.54 -2.5 6,341,394 + AO353_29190 0.64 -1.3 6,341,395 - AO353_29190 0.64 -0.2 6,341,504 - AO353_29190 0.73 -1.3 6,341,512 + AO353_29190 0.73 +1.2 6,341,602 + AO353_29190 0.81 -0.8 6,341,674 + AO353_29190 0.87 +1.2 6,341,674 + AO353_29190 0.87 -0.4 6,341,727 + +1.9 6,341,728 - +1.8 6,341,741 - -0.4 6,341,795 + +2.7 6,341,795 + -1.1 6,341,795 + -0.4 6,341,796 - +1.3 6,341,796 - -0.9 6,341,796 - -0.9 6,341,823 + +0.3 6,341,823 + +0.9 6,341,823 + -0.7 6,341,832 + +1.3 6,341,832 + -0.2 6,341,832 + -1.0 6,341,832 + -0.7 6,341,833 - -1.1 6,341,833 - -1.3 6,341,833 - -1.2 6,341,833 - -0.9 6,341,833 - -0.3 6,341,851 + +0.9 6,341,862 + -2.0 6,341,862 + -0.3 6,341,863 - -0.2 6,341,863 - -0.3 6,341,863 - -0.9 6,341,887 + -2.9 6,341,968 + -2.0 6,341,969 - -0.5 6,341,969 - +0.2 6,341,969 - -2.2 6,342,082 + AO353_29195 0.36 -0.8 6,342,082 + AO353_29195 0.36 -1.7 6,342,082 + AO353_29195 0.36 -2.0 6,342,082 + AO353_29195 0.36 -1.0 6,342,101 + AO353_29195 0.47 -1.9 6,342,101 + AO353_29195 0.47 -1.8 6,342,102 - AO353_29195 0.47 -1.3 6,342,107 + AO353_29195 0.50 +1.7 6,342,107 + AO353_29195 0.50 -1.1 6,342,107 + AO353_29195 0.50 -2.0 6,342,107 + AO353_29195 0.50 +3.0 6,342,107 + AO353_29195 0.50 +0.1 6,342,107 + AO353_29195 0.50 -1.0 6,342,108 - AO353_29195 0.51 -0.3 6,342,108 - AO353_29195 0.51 -1.3 6,342,108 - AO353_29195 0.51 +0.5 6,342,108 - AO353_29195 0.51 -1.3 6,342,108 - AO353_29195 0.51 -2.3 6,342,175 + AO353_29195 0.89 +1.7 6,342,175 + AO353_29195 0.89 -2.4 6,342,175 + AO353_29195 0.89 -0.1 6,342,175 + AO353_29195 0.89 -1.5 6,342,175 + AO353_29195 0.89 -2.4 6,342,176 - +0.7 6,342,176 - -1.1 6,342,176 - +0.3 6,342,176 - -0.3 6,342,191 + +0.2 6,342,191 + +0.1 6,342,192 - +0.7 6,342,192 - -0.7 6,342,227 + +0.9 6,342,346 + AO353_29200 0.14 +0.4 6,342,346 + AO353_29200 0.14 +0.7 6,342,346 + AO353_29200 0.14 -0.1 6,342,346 + AO353_29200 0.14 +1.7 6,342,346 + AO353_29200 0.14 -1.8 6,342,347 - AO353_29200 0.15 -1.0 6,342,347 - AO353_29200 0.15 +1.7 6,342,347 - AO353_29200 0.15 +0.4 6,342,483 + AO353_29200 0.44 -0.9 6,342,483 + AO353_29200 0.44 +1.8 6,342,483 + AO353_29200 0.44 -0.9 6,342,483 + AO353_29200 0.44 +1.0 6,342,483 + AO353_29200 0.44 -0.9 6,342,483 + AO353_29200 0.44 -1.9 6,342,484 - AO353_29200 0.44 -0.7 6,342,484 - AO353_29200 0.44 +1.7 6,342,502 + AO353_29200 0.48 +0.3 6,342,520 + AO353_29200 0.51 -0.6 6,342,521 - AO353_29200 0.52 +1.7 6,342,521 - AO353_29200 0.52 +1.3 6,342,521 - AO353_29200 0.52 -0.7 6,342,521 - AO353_29200 0.52 -0.8 6,342,535 + AO353_29200 0.55 -0.1 6,342,535 + AO353_29200 0.55 +1.1 6,342,535 + AO353_29200 0.55 -0.0 6,342,535 + AO353_29200 0.55 +3.1 6,342,535 + AO353_29200 0.55 +0.7 6,342,535 + AO353_29200 0.55 +1.5 6,342,535 + AO353_29200 0.55 +0.7 6,342,535 + AO353_29200 0.55 +0.7 6,342,535 + AO353_29200 0.55 +1.1 6,342,535 + AO353_29200 0.55 -0.0 6,342,536 - AO353_29200 0.55 -1.5 6,342,536 - AO353_29200 0.55 +0.7 6,342,536 - AO353_29200 0.55 +0.1 6,342,548 + AO353_29200 0.57 -0.0 6,342,548 + AO353_29200 0.57 -1.1 6,342,548 + AO353_29200 0.57 -1.5 6,342,548 + AO353_29200 0.57 -0.6 6,342,549 - AO353_29200 0.58 -1.0 6,342,549 - AO353_29200 0.58 -0.0 6,342,549 - AO353_29200 0.58 +0.5 6,342,549 - AO353_29200 0.58 +0.5 6,342,549 - AO353_29200 0.58 -0.5 6,342,549 - AO353_29200 0.58 -0.6 6,342,549 - AO353_29200 0.58 -1.1 6,342,549 - AO353_29200 0.58 -1.3 6,342,652 + AO353_29200 0.80 -1.5 6,342,652 + AO353_29200 0.80 -2.9 6,342,653 - AO353_29200 0.80 +0.3 6,342,675 + AO353_29200 0.85 +1.1 6,342,675 + AO353_29200 0.85 -0.3 6,342,690 - AO353_29200 0.88 -0.3 6,342,693 + +0.1 6,342,693 + AO353_29200 0.88 -1.5 6,342,693 + AO353_29200 0.88 -1.3 6,342,693 + AO353_29200 0.88 -0.3 6,342,693 + AO353_29200 0.88 -1.9 6,342,693 + AO353_29200 0.88 +0.7 6,342,693 + AO353_29200 0.88 -2.2 6,342,693 + AO353_29200 0.88 +0.3 6,342,694 - AO353_29200 0.89 -0.1 6,342,694 - AO353_29200 0.89 -0.0 6,342,694 - AO353_29200 0.89 -2.2 6,342,694 - AO353_29200 0.89 +0.9 6,342,694 - AO353_29200 0.89 +1.4 6,342,694 - AO353_29200 0.89 +0.8 6,342,697 + AO353_29200 0.89 -0.1 6,342,697 + AO353_29200 0.89 +0.7 6,342,698 - AO353_29200 0.90 +1.2 6,342,698 - AO353_29200 0.90 +1.1 6,342,698 - AO353_29200 0.90 -1.9 6,342,698 - AO353_29200 0.90 +0.9 6,342,698 - AO353_29200 0.90 +1.5 6,342,790 + +3.0 6,342,791 - -1.4 6,342,791 - -1.1 6,342,791 - +0.6 6,342,815 - +0.3 6,342,815 - +0.3 6,342,815 - -1.3 6,342,864 - -1.3 6,342,976 + -1.7 6,342,976 + +0.7 6,342,976 + +1.7 6,342,976 + -2.0 6,342,976 + -2.2 6,342,976 + +0.1 6,342,977 - -2.4 6,342,977 - -2.0 6,343,025 - +0.7 6,343,025 - -0.1 6,343,061 + +2.1 6,343,125 - -0.8 6,343,129 + +0.5 6,343,129 + -0.3 6,343,129 + +1.1 6,343,130 - -1.8 6,343,137 + -2.6 6,343,138 - +1.3 6,343,143 - +1.1 6,343,143 - +0.3 6,343,158 + +1.4 6,343,158 + +1.1 6,343,159 - +1.3 6,343,159 - +0.5 6,343,163 - +2.3 6,343,171 - -0.6 6,343,171 - +0.5 6,343,171 - -1.2 6,343,173 - +2.9 6,343,173 - +1.2 6,343,186 + -2.4 6,343,187 - +1.8 6,343,191 + -1.5 6,343,191 + +1.3 6,343,192 - +0.7
Or see this region's nucleotide sequence