Experiment: L-Citrulline
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_21375 and AO353_21380 are separated by 354 nucleotides AO353_21380 and AO353_21385 are separated by 70 nucleotides
AO353_21375: AO353_21375 - oxidoreductase, at 4,679,661 to 4,680,713
_21375
AO353_21380: AO353_21380 - rhizopine-binding protein, at 4,681,068 to 4,681,994
_21380
AO353_21385: AO353_21385 - m-Inositol ABC transporter, ATPase component (itaA) (from data) , at 4,682,065 to 4,683,630
_21385
Position (kb)
4681
4682 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4680.109 kb on + strand, within AO353_21375 at 4680.109 kb on + strand, within AO353_21375 at 4680.109 kb on + strand, within AO353_21375 at 4680.109 kb on + strand, within AO353_21375 at 4680.110 kb on - strand, within AO353_21375 at 4680.110 kb on - strand, within AO353_21375 at 4680.110 kb on - strand, within AO353_21375 at 4680.225 kb on + strand, within AO353_21375 at 4680.225 kb on + strand, within AO353_21375 at 4680.241 kb on - strand, within AO353_21375 at 4680.323 kb on + strand, within AO353_21375 at 4680.323 kb on + strand, within AO353_21375 at 4680.323 kb on + strand, within AO353_21375 at 4680.324 kb on - strand, within AO353_21375 at 4680.324 kb on - strand, within AO353_21375 at 4680.324 kb on - strand, within AO353_21375 at 4680.324 kb on - strand, within AO353_21375 at 4680.381 kb on + strand, within AO353_21375 at 4680.549 kb on + strand, within AO353_21375 at 4680.550 kb on - strand, within AO353_21375 at 4680.550 kb on - strand, within AO353_21375 at 4680.553 kb on + strand, within AO353_21375 at 4680.553 kb on + strand, within AO353_21375 at 4680.553 kb on + strand, within AO353_21375 at 4680.553 kb on + strand, within AO353_21375 at 4680.553 kb on + strand, within AO353_21375 at 4680.554 kb on - strand, within AO353_21375 at 4680.554 kb on - strand, within AO353_21375 at 4680.632 kb on - strand at 4680.632 kb on - strand at 4680.776 kb on - strand at 4680.846 kb on + strand at 4680.846 kb on + strand at 4680.846 kb on + strand at 4680.846 kb on + strand at 4680.847 kb on - strand at 4680.847 kb on - strand at 4680.847 kb on - strand at 4680.889 kb on + strand at 4680.889 kb on + strand at 4680.890 kb on - strand at 4681.035 kb on + strand at 4681.036 kb on - strand at 4681.042 kb on + strand at 4681.042 kb on + strand at 4681.042 kb on + strand at 4681.042 kb on + strand at 4681.042 kb on + strand at 4681.043 kb on - strand at 4681.043 kb on - strand at 4681.043 kb on - strand at 4681.043 kb on - strand at 4681.188 kb on + strand, within AO353_21380 at 4681.188 kb on + strand at 4681.188 kb on + strand, within AO353_21380 at 4681.188 kb on + strand, within AO353_21380 at 4681.189 kb on - strand, within AO353_21380 at 4681.189 kb on - strand, within AO353_21380 at 4681.189 kb on - strand, within AO353_21380 at 4681.189 kb on - strand, within AO353_21380 at 4681.402 kb on - strand, within AO353_21380 at 4681.402 kb on - strand, within AO353_21380 at 4681.402 kb on - strand, within AO353_21380 at 4681.449 kb on - strand, within AO353_21380 at 4681.449 kb on - strand, within AO353_21380 at 4681.494 kb on + strand, within AO353_21380 at 4681.494 kb on + strand, within AO353_21380 at 4681.494 kb on + strand, within AO353_21380 at 4681.495 kb on - strand, within AO353_21380 at 4681.495 kb on - strand, within AO353_21380 at 4681.495 kb on - strand, within AO353_21380 at 4681.782 kb on - strand, within AO353_21380 at 4681.782 kb on - strand, within AO353_21380 at 4681.808 kb on + strand, within AO353_21380 at 4681.809 kb on - strand, within AO353_21380 at 4681.809 kb on - strand, within AO353_21380 at 4681.809 kb on - strand, within AO353_21380 at 4681.992 kb on + strand at 4681.992 kb on + strand at 4681.992 kb on + strand at 4681.993 kb on - strand at 4682.017 kb on + strand at 4682.017 kb on + strand at 4682.018 kb on - strand at 4682.018 kb on - strand at 4682.018 kb on - strand at 4682.018 kb on - strand at 4682.018 kb on - strand at 4682.018 kb on - strand at 4682.018 kb on - strand at 4682.018 kb on - strand at 4682.018 kb on - strand at 4682.057 kb on - strand at 4682.140 kb on + strand at 4682.140 kb on + strand at 4682.293 kb on + strand, within AO353_21385 at 4682.293 kb on + strand, within AO353_21385 at 4682.293 kb on + strand, within AO353_21385 at 4682.293 kb on + strand, within AO353_21385 at 4682.293 kb on + strand, within AO353_21385 at 4682.294 kb on - strand, within AO353_21385 at 4682.294 kb on - strand, within AO353_21385 at 4682.294 kb on - strand, within AO353_21385 at 4682.321 kb on + strand, within AO353_21385 at 4682.605 kb on + strand, within AO353_21385 at 4682.606 kb on - strand, within AO353_21385 at 4682.606 kb on - strand, within AO353_21385 at 4682.606 kb on - strand, within AO353_21385 at 4682.719 kb on + strand, within AO353_21385 at 4682.719 kb on + strand, within AO353_21385 at 4682.719 kb on + strand, within AO353_21385 at 4682.719 kb on + strand, within AO353_21385 at 4682.719 kb on + strand, within AO353_21385 at 4682.719 kb on + strand, within AO353_21385 at 4682.719 kb on + strand at 4682.719 kb on + strand, within AO353_21385 at 4682.719 kb on + strand, within AO353_21385 at 4682.719 kb on + strand, within AO353_21385 at 4682.719 kb on + strand, within AO353_21385 at 4682.719 kb on + strand, within AO353_21385 at 4682.719 kb on + strand, within AO353_21385 at 4682.719 kb on + strand, within AO353_21385 at 4682.719 kb on + strand, within AO353_21385 at 4682.720 kb on - strand, within AO353_21385 at 4682.720 kb on - strand, within AO353_21385 at 4682.720 kb on - strand, within AO353_21385 at 4682.720 kb on - strand, within AO353_21385 at 4682.720 kb on - strand at 4682.720 kb on - strand, within AO353_21385 at 4682.720 kb on - strand, within AO353_21385 at 4682.720 kb on - strand, within AO353_21385 at 4682.720 kb on - strand, within AO353_21385 at 4682.720 kb on - strand, within AO353_21385 at 4682.720 kb on - strand, within AO353_21385 at 4682.720 kb on - strand, within AO353_21385 at 4682.720 kb on - strand, within AO353_21385 at 4682.720 kb on - strand, within AO353_21385 at 4682.720 kb on - strand, within AO353_21385 at 4682.720 kb on - strand, within AO353_21385 at 4682.721 kb on + strand, within AO353_21385 at 4682.721 kb on + strand, within AO353_21385 at 4682.721 kb on + strand, within AO353_21385 at 4682.721 kb on + strand, within AO353_21385 at 4682.722 kb on - strand, within AO353_21385 at 4682.788 kb on + strand, within AO353_21385 at 4682.788 kb on + strand, within AO353_21385 at 4682.788 kb on + strand, within AO353_21385 at 4682.788 kb on + strand, within AO353_21385 at 4682.788 kb on + strand, within AO353_21385 at 4682.788 kb on + strand, within AO353_21385 at 4682.788 kb on + strand, within AO353_21385 at 4682.788 kb on + strand, within AO353_21385 at 4682.788 kb on + strand, within AO353_21385 at 4682.788 kb on + strand, within AO353_21385 at 4682.788 kb on + strand, within AO353_21385 at 4682.789 kb on - strand, within AO353_21385 at 4682.789 kb on - strand, within AO353_21385 at 4682.789 kb on - strand, within AO353_21385
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline remove 4,680,109 + AO353_21375 0.43 -0.5 4,680,109 + AO353_21375 0.43 +0.5 4,680,109 + AO353_21375 0.43 -2.5 4,680,109 + AO353_21375 0.43 +0.3 4,680,110 - AO353_21375 0.43 -0.5 4,680,110 - AO353_21375 0.43 +1.7 4,680,110 - AO353_21375 0.43 +2.6 4,680,225 + AO353_21375 0.54 -1.6 4,680,225 + AO353_21375 0.54 -2.1 4,680,241 - AO353_21375 0.55 -0.6 4,680,323 + AO353_21375 0.63 +0.1 4,680,323 + AO353_21375 0.63 +0.5 4,680,323 + AO353_21375 0.63 -0.5 4,680,324 - AO353_21375 0.63 +0.8 4,680,324 - AO353_21375 0.63 -0.9 4,680,324 - AO353_21375 0.63 -1.3 4,680,324 - AO353_21375 0.63 -1.2 4,680,381 + AO353_21375 0.68 +0.7 4,680,549 + AO353_21375 0.84 +0.1 4,680,550 - AO353_21375 0.84 -1.6 4,680,550 - AO353_21375 0.84 +1.1 4,680,553 + AO353_21375 0.85 -0.5 4,680,553 + AO353_21375 0.85 -0.2 4,680,553 + AO353_21375 0.85 -0.9 4,680,553 + AO353_21375 0.85 +0.7 4,680,553 + AO353_21375 0.85 +0.4 4,680,554 - AO353_21375 0.85 +0.8 4,680,554 - AO353_21375 0.85 +0.4 4,680,632 - -0.1 4,680,632 - +1.7 4,680,776 - +0.9 4,680,846 + -1.1 4,680,846 + -1.3 4,680,846 + -1.0 4,680,846 + -1.5 4,680,847 - -1.1 4,680,847 - -0.1 4,680,847 - +0.7 4,680,889 + -2.0 4,680,889 + -0.1 4,680,890 - +1.3 4,681,035 + -1.1 4,681,036 - +2.6 4,681,042 + +0.5 4,681,042 + -2.4 4,681,042 + -0.6 4,681,042 + -0.3 4,681,042 + +0.7 4,681,043 - +0.4 4,681,043 - +0.4 4,681,043 - -0.3 4,681,043 - +2.1 4,681,188 + AO353_21380 0.13 +1.7 4,681,188 + -1.3 4,681,188 + AO353_21380 0.13 -0.9 4,681,188 + AO353_21380 0.13 +1.1 4,681,189 - AO353_21380 0.13 -1.6 4,681,189 - AO353_21380 0.13 +0.6 4,681,189 - AO353_21380 0.13 +2.2 4,681,189 - AO353_21380 0.13 -1.5 4,681,402 - AO353_21380 0.36 +2.5 4,681,402 - AO353_21380 0.36 -1.6 4,681,402 - AO353_21380 0.36 -1.3 4,681,449 - AO353_21380 0.41 +0.1 4,681,449 - AO353_21380 0.41 -2.1 4,681,494 + AO353_21380 0.46 -1.1 4,681,494 + AO353_21380 0.46 +1.1 4,681,494 + AO353_21380 0.46 +1.0 4,681,495 - AO353_21380 0.46 +1.3 4,681,495 - AO353_21380 0.46 +0.1 4,681,495 - AO353_21380 0.46 +0.1 4,681,782 - AO353_21380 0.77 -1.5 4,681,782 - AO353_21380 0.77 +1.9 4,681,808 + AO353_21380 0.80 +1.7 4,681,809 - AO353_21380 0.80 -0.6 4,681,809 - AO353_21380 0.80 -0.5 4,681,809 - AO353_21380 0.80 +0.9 4,681,992 + +1.3 4,681,992 + -1.6 4,681,992 + -0.3 4,681,993 - +0.2 4,682,017 + +2.5 4,682,017 + +1.7 4,682,018 - -1.1 4,682,018 - +0.5 4,682,018 - +3.5 4,682,018 - +1.7 4,682,018 - +1.3 4,682,018 - +0.1 4,682,018 - +1.4 4,682,018 - +0.8 4,682,018 - -1.6 4,682,057 - -1.0 4,682,140 + +0.3 4,682,140 + -1.5 4,682,293 + AO353_21385 0.15 -0.9 4,682,293 + AO353_21385 0.15 -0.6 4,682,293 + AO353_21385 0.15 -2.1 4,682,293 + AO353_21385 0.15 -2.2 4,682,293 + AO353_21385 0.15 +1.9 4,682,294 - AO353_21385 0.15 -1.7 4,682,294 - AO353_21385 0.15 +1.8 4,682,294 - AO353_21385 0.15 +0.6 4,682,321 + AO353_21385 0.16 +0.6 4,682,605 + AO353_21385 0.34 +2.5 4,682,606 - AO353_21385 0.35 -1.1 4,682,606 - AO353_21385 0.35 +1.3 4,682,606 - AO353_21385 0.35 -0.6 4,682,719 + AO353_21385 0.42 -0.7 4,682,719 + AO353_21385 0.42 -0.6 4,682,719 + AO353_21385 0.42 +1.8 4,682,719 + AO353_21385 0.42 -0.9 4,682,719 + AO353_21385 0.42 -1.5 4,682,719 + AO353_21385 0.42 -0.3 4,682,719 + -1.3 4,682,719 + AO353_21385 0.42 -3.1 4,682,719 + AO353_21385 0.42 -0.9 4,682,719 + AO353_21385 0.42 -1.1 4,682,719 + AO353_21385 0.42 -0.7 4,682,719 + AO353_21385 0.42 -0.2 4,682,719 + AO353_21385 0.42 -1.6 4,682,719 + AO353_21385 0.42 -1.1 4,682,719 + AO353_21385 0.42 +1.1 4,682,720 - AO353_21385 0.42 +0.7 4,682,720 - AO353_21385 0.42 +0.7 4,682,720 - AO353_21385 0.42 -0.3 4,682,720 - AO353_21385 0.42 +0.3 4,682,720 - -0.3 4,682,720 - AO353_21385 0.42 +1.1 4,682,720 - AO353_21385 0.42 -0.9 4,682,720 - AO353_21385 0.42 -1.6 4,682,720 - AO353_21385 0.42 +1.5 4,682,720 - AO353_21385 0.42 +0.1 4,682,720 - AO353_21385 0.42 -2.6 4,682,720 - AO353_21385 0.42 +2.3 4,682,720 - AO353_21385 0.42 -0.5 4,682,720 - AO353_21385 0.42 +0.1 4,682,720 - AO353_21385 0.42 -3.2 4,682,720 - AO353_21385 0.42 -1.7 4,682,721 + AO353_21385 0.42 +2.0 4,682,721 + AO353_21385 0.42 +1.0 4,682,721 + AO353_21385 0.42 -1.3 4,682,721 + AO353_21385 0.42 -0.3 4,682,722 - AO353_21385 0.42 -0.7 4,682,788 + AO353_21385 0.46 +1.6 4,682,788 + AO353_21385 0.46 +0.1 4,682,788 + AO353_21385 0.46 +2.6 4,682,788 + AO353_21385 0.46 +0.1 4,682,788 + AO353_21385 0.46 +1.2 4,682,788 + AO353_21385 0.46 -0.7 4,682,788 + AO353_21385 0.46 -0.6 4,682,788 + AO353_21385 0.46 -2.5 4,682,788 + AO353_21385 0.46 +0.1 4,682,788 + AO353_21385 0.46 +0.7 4,682,788 + AO353_21385 0.46 +1.6 4,682,789 - AO353_21385 0.46 -3.0 4,682,789 - AO353_21385 0.46 -0.2 4,682,789 - AO353_21385 0.46 +0.5
Or see this region's nucleotide sequence