Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_14735

Experiment: L-Citrulline

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_14725 and AO353_14730 are separated by 281 nucleotidesAO353_14730 and AO353_14735 are separated by 3 nucleotidesAO353_14735 and AO353_14740 are separated by 73 nucleotides AO353_14725: AO353_14725 - transcriptional regulator, at 3,264,096 to 3,264,998 _14725 AO353_14730: AO353_14730 - hypothetical protein, at 3,265,280 to 3,265,723 _14730 AO353_14735: AO353_14735 - hypothetical protein, at 3,265,727 to 3,266,314 _14735 AO353_14740: AO353_14740 - GTP-binding protein, at 3,266,388 to 3,267,488 _14740 Position (kb) 3265 3266 3267Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 3264.815 kb on + strand, within AO353_14725at 3264.815 kb on + strand, within AO353_14725at 3264.822 kb on + strand, within AO353_14725at 3264.822 kb on + strand, within AO353_14725at 3264.822 kb on + strand, within AO353_14725at 3264.822 kb on + strand, within AO353_14725at 3264.822 kb on + strand, within AO353_14725at 3264.822 kb on + strand, within AO353_14725at 3264.822 kb on + strand, within AO353_14725at 3264.822 kb on + strand, within AO353_14725at 3264.822 kb on + strand, within AO353_14725at 3264.822 kb on + strand, within AO353_14725at 3264.822 kb on + strand, within AO353_14725at 3264.822 kb on + strand, within AO353_14725at 3264.822 kb on + strand, within AO353_14725at 3264.822 kb on + strand, within AO353_14725at 3264.822 kb on + strand, within AO353_14725at 3264.822 kb on + strand, within AO353_14725at 3264.822 kb on + strand, within AO353_14725at 3264.822 kb on + strand, within AO353_14725at 3264.822 kb on + strand, within AO353_14725at 3264.823 kb on - strand, within AO353_14725at 3264.823 kb on - strand, within AO353_14725at 3264.823 kb on - strand, within AO353_14725at 3264.823 kb on - strand, within AO353_14725at 3264.823 kb on - strand, within AO353_14725at 3264.823 kb on - strand, within AO353_14725at 3264.823 kb on - strand, within AO353_14725at 3264.823 kb on - strand, within AO353_14725at 3264.823 kb on - strand, within AO353_14725at 3264.823 kb on - strand, within AO353_14725at 3264.823 kb on - strand, within AO353_14725at 3264.823 kb on - strand, within AO353_14725at 3264.823 kb on - strand, within AO353_14725at 3264.823 kb on - strand, within AO353_14725at 3264.823 kb on - strand, within AO353_14725at 3264.823 kb on - strand, within AO353_14725at 3264.823 kb on - strand, within AO353_14725at 3264.823 kb on - strand, within AO353_14725at 3264.828 kb on + strand, within AO353_14725at 3264.829 kb on - strand, within AO353_14725at 3264.829 kb on - strand, within AO353_14725at 3264.877 kb on + strand, within AO353_14725at 3264.878 kb on - strand, within AO353_14725at 3264.878 kb on - strand, within AO353_14725at 3264.878 kb on - strand, within AO353_14725at 3264.878 kb on - strand, within AO353_14725at 3264.918 kb on + strandat 3264.919 kb on - strandat 3264.921 kb on + strandat 3264.921 kb on + strandat 3264.921 kb on + strandat 3264.921 kb on + strandat 3264.921 kb on + strandat 3264.922 kb on - strandat 3264.922 kb on - strandat 3264.922 kb on - strandat 3264.922 kb on - strandat 3265.149 kb on + strandat 3265.149 kb on + strandat 3265.195 kb on + strandat 3265.195 kb on + strandat 3265.195 kb on + strandat 3265.195 kb on + strandat 3265.195 kb on + strandat 3265.196 kb on - strandat 3265.196 kb on - strandat 3265.209 kb on + strandat 3265.209 kb on + strandat 3265.209 kb on + strandat 3265.209 kb on + strandat 3265.209 kb on + strandat 3265.209 kb on + strandat 3265.209 kb on + strandat 3265.210 kb on - strandat 3265.210 kb on - strandat 3265.210 kb on - strandat 3265.210 kb on - strandat 3265.210 kb on - strandat 3265.238 kb on - strandat 3265.553 kb on + strand, within AO353_14730at 3265.553 kb on + strand, within AO353_14730at 3265.553 kb on + strand, within AO353_14730at 3265.553 kb on + strand, within AO353_14730at 3265.553 kb on + strand, within AO353_14730at 3265.553 kb on + strand, within AO353_14730at 3265.553 kb on + strand, within AO353_14730at 3265.553 kb on + strand, within AO353_14730at 3265.553 kb on + strand, within AO353_14730at 3265.553 kb on + strand, within AO353_14730at 3265.553 kb on + strand, within AO353_14730at 3265.553 kb on + strand, within AO353_14730at 3265.554 kb on - strand, within AO353_14730at 3265.554 kb on - strand, within AO353_14730at 3265.554 kb on - strand, within AO353_14730at 3265.556 kb on + strand, within AO353_14730at 3265.556 kb on + strand, within AO353_14730at 3265.556 kb on + strand, within AO353_14730at 3265.556 kb on + strand, within AO353_14730at 3265.556 kb on + strand, within AO353_14730at 3265.556 kb on + strand, within AO353_14730at 3265.556 kb on + strand, within AO353_14730at 3265.556 kb on + strand, within AO353_14730at 3265.557 kb on - strand, within AO353_14730at 3265.557 kb on - strand, within AO353_14730at 3265.557 kb on - strand, within AO353_14730at 3265.557 kb on - strand, within AO353_14730at 3265.557 kb on - strand, within AO353_14730at 3265.636 kb on + strand, within AO353_14730at 3265.636 kb on + strand, within AO353_14730at 3265.637 kb on - strand, within AO353_14730at 3265.668 kb on + strand, within AO353_14730at 3265.711 kb on + strandat 3265.711 kb on + strandat 3265.711 kb on + strandat 3265.711 kb on + strandat 3265.711 kb on + strandat 3265.711 kb on + strandat 3265.711 kb on + strandat 3265.712 kb on - strandat 3265.712 kb on - strandat 3265.712 kb on - strandat 3265.712 kb on - strandat 3265.712 kb on - strandat 3265.712 kb on - strandat 3265.733 kb on + strandat 3265.733 kb on + strandat 3265.733 kb on + strandat 3265.733 kb on + strandat 3265.733 kb on + strandat 3265.733 kb on + strandat 3265.733 kb on + strandat 3265.733 kb on + strandat 3265.733 kb on + strandat 3265.733 kb on + strandat 3265.733 kb on + strandat 3265.733 kb on + strandat 3265.733 kb on + strandat 3265.733 kb on + strandat 3265.734 kb on - strandat 3265.734 kb on - strandat 3265.734 kb on - strandat 3265.734 kb on - strandat 3265.734 kb on - strandat 3265.734 kb on - strandat 3265.734 kb on - strandat 3265.734 kb on - strandat 3265.734 kb on - strandat 3265.734 kb on - strandat 3265.734 kb on - strandat 3265.734 kb on - strandat 3265.734 kb on - strandat 3265.734 kb on - strandat 3265.951 kb on + strand, within AO353_14735at 3265.951 kb on + strand, within AO353_14735at 3265.951 kb on + strand, within AO353_14735at 3265.952 kb on - strand, within AO353_14735at 3265.952 kb on - strand, within AO353_14735at 3265.952 kb on - strand, within AO353_14735at 3265.960 kb on - strand, within AO353_14735at 3266.069 kb on + strand, within AO353_14735at 3266.069 kb on + strand, within AO353_14735at 3266.069 kb on + strand, within AO353_14735at 3266.070 kb on - strand, within AO353_14735at 3266.070 kb on - strand, within AO353_14735at 3266.071 kb on + strand, within AO353_14735at 3266.071 kb on + strand, within AO353_14735at 3266.294 kb on + strandat 3266.294 kb on + strandat 3266.294 kb on + strandat 3266.294 kb on + strandat 3266.294 kb on + strandat 3266.294 kb on + strandat 3266.295 kb on - strandat 3266.295 kb on - strandat 3266.295 kb on - strandat 3266.295 kb on - strandat 3266.295 kb on - strandat 3266.295 kb on - strandat 3266.304 kb on - strandat 3266.304 kb on - strandat 3266.304 kb on - strandat 3266.312 kb on + strandat 3266.312 kb on + strandat 3266.313 kb on - strandat 3266.323 kb on - strandat 3266.323 kb on - strandat 3266.334 kb on - strandat 3266.335 kb on + strandat 3266.335 kb on + strandat 3266.335 kb on + strandat 3266.335 kb on + strandat 3266.335 kb on + strandat 3266.335 kb on + strandat 3266.335 kb on + strandat 3266.335 kb on + strandat 3266.336 kb on - strandat 3266.336 kb on - strandat 3266.336 kb on - strandat 3266.336 kb on - strandat 3266.336 kb on - strandat 3266.389 kb on + strandat 3266.390 kb on - strandat 3266.434 kb on + strandat 3266.435 kb on - strandat 3266.435 kb on - strandat 3266.435 kb on - strandat 3266.435 kb on - strandat 3266.491 kb on + strandat 3266.491 kb on + strandat 3266.509 kb on + strand, within AO353_14740at 3266.510 kb on - strand, within AO353_14740at 3266.872 kb on + strand, within AO353_14740at 3266.872 kb on + strand, within AO353_14740at 3266.872 kb on + strand, within AO353_14740at 3266.873 kb on - strand, within AO353_14740at 3266.873 kb on - strand, within AO353_14740at 3266.873 kb on - strand, within AO353_14740

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Citrulline
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3,264,815 + AO353_14725 0.80 -3.0
3,264,815 + AO353_14725 0.80 +0.2
3,264,822 + AO353_14725 0.80 -1.8
3,264,822 + AO353_14725 0.80 +0.3
3,264,822 + AO353_14725 0.80 -1.0
3,264,822 + AO353_14725 0.80 +0.7
3,264,822 + AO353_14725 0.80 +0.9
3,264,822 + AO353_14725 0.80 +0.4
3,264,822 + AO353_14725 0.80 -0.1
3,264,822 + AO353_14725 0.80 -1.7
3,264,822 + AO353_14725 0.80 +0.2
3,264,822 + AO353_14725 0.80 +2.7
3,264,822 + AO353_14725 0.80 -0.3
3,264,822 + AO353_14725 0.80 +1.5
3,264,822 + AO353_14725 0.80 -0.8
3,264,822 + AO353_14725 0.80 -1.1
3,264,822 + AO353_14725 0.80 -2.4
3,264,822 + AO353_14725 0.80 +0.7
3,264,822 + AO353_14725 0.80 +1.8
3,264,822 + AO353_14725 0.80 +0.0
3,264,822 + AO353_14725 0.80 +0.6
3,264,823 - AO353_14725 0.81 +1.6
3,264,823 - AO353_14725 0.81 +0.2
3,264,823 - AO353_14725 0.81 -1.8
3,264,823 - AO353_14725 0.81 +0.7
3,264,823 - AO353_14725 0.81 -0.9
3,264,823 - AO353_14725 0.81 -1.3
3,264,823 - AO353_14725 0.81 -1.2
3,264,823 - AO353_14725 0.81 +0.7
3,264,823 - AO353_14725 0.81 +0.5
3,264,823 - AO353_14725 0.81 +0.1
3,264,823 - AO353_14725 0.81 -0.9
3,264,823 - AO353_14725 0.81 +1.5
3,264,823 - AO353_14725 0.81 -2.2
3,264,823 - AO353_14725 0.81 -0.0
3,264,823 - AO353_14725 0.81 -0.8
3,264,823 - AO353_14725 0.81 -0.8
3,264,823 - AO353_14725 0.81 -0.7
3,264,823 - AO353_14725 0.81 -0.0
3,264,828 + AO353_14725 0.81 -1.7
3,264,829 - AO353_14725 0.81 -0.6
3,264,829 - AO353_14725 0.81 -1.6
3,264,877 + AO353_14725 0.86 -1.6
3,264,878 - AO353_14725 0.87 -0.6
3,264,878 - AO353_14725 0.87 +1.7
3,264,878 - AO353_14725 0.87 -1.5
3,264,878 - AO353_14725 0.87 -0.5
3,264,918 + +2.3
3,264,919 - -2.4
3,264,921 + -0.6
3,264,921 + -0.3
3,264,921 + -1.4
3,264,921 + +0.2
3,264,921 + -0.3
3,264,922 - -1.0
3,264,922 - -1.3
3,264,922 - +1.8
3,264,922 - -0.3
3,265,149 + +0.5
3,265,149 + -1.3
3,265,195 + +1.5
3,265,195 + +1.1
3,265,195 + -0.3
3,265,195 + +0.5
3,265,195 + +1.7
3,265,196 - +0.4
3,265,196 - +0.0
3,265,209 + -0.3
3,265,209 + +1.3
3,265,209 + +0.7
3,265,209 + -0.8
3,265,209 + +1.1
3,265,209 + -3.0
3,265,209 + -2.1
3,265,210 - +0.2
3,265,210 - +0.7
3,265,210 - -2.0
3,265,210 - +1.1
3,265,210 - +1.8
3,265,238 - +2.2
3,265,553 + AO353_14730 0.61 -3.4
3,265,553 + AO353_14730 0.61 -2.4
3,265,553 + AO353_14730 0.61 +0.6
3,265,553 + AO353_14730 0.61 +0.2
3,265,553 + AO353_14730 0.61 -1.0
3,265,553 + AO353_14730 0.61 +0.6
3,265,553 + AO353_14730 0.61 -0.7
3,265,553 + AO353_14730 0.61 -0.4
3,265,553 + AO353_14730 0.61 +2.2
3,265,553 + AO353_14730 0.61 -0.1
3,265,553 + AO353_14730 0.61 -1.4
3,265,553 + AO353_14730 0.61 +0.7
3,265,554 - AO353_14730 0.62 -0.3
3,265,554 - AO353_14730 0.62 +2.7
3,265,554 - AO353_14730 0.62 +0.3
3,265,556 + AO353_14730 0.62 +0.2
3,265,556 + AO353_14730 0.62 -1.3
3,265,556 + AO353_14730 0.62 -1.4
3,265,556 + AO353_14730 0.62 +0.9
3,265,556 + AO353_14730 0.62 -0.8
3,265,556 + AO353_14730 0.62 +0.2
3,265,556 + AO353_14730 0.62 -0.6
3,265,556 + AO353_14730 0.62 -0.4
3,265,557 - AO353_14730 0.62 +3.5
3,265,557 - AO353_14730 0.62 +0.4
3,265,557 - AO353_14730 0.62 -1.1
3,265,557 - AO353_14730 0.62 +0.2
3,265,557 - AO353_14730 0.62 -1.0
3,265,636 + AO353_14730 0.80 +0.5
3,265,636 + AO353_14730 0.80 +2.1
3,265,637 - AO353_14730 0.80 +1.0
3,265,668 + AO353_14730 0.87 +1.3
3,265,711 + -1.6
3,265,711 + -1.6
3,265,711 + +0.6
3,265,711 + +0.1
3,265,711 + -0.3
3,265,711 + -0.0
3,265,711 + -0.8
3,265,712 - +2.0
3,265,712 - +0.2
3,265,712 - -1.6
3,265,712 - -1.7
3,265,712 - -1.8
3,265,712 - +0.3
3,265,733 + -1.4
3,265,733 + -0.4
3,265,733 + -1.0
3,265,733 + -0.3
3,265,733 + -0.4
3,265,733 + +1.4
3,265,733 + +1.1
3,265,733 + -0.3
3,265,733 + +0.2
3,265,733 + +1.2
3,265,733 + -0.0
3,265,733 + -0.7
3,265,733 + -0.5
3,265,733 + +0.7
3,265,734 - -1.1
3,265,734 - +0.0
3,265,734 - +0.7
3,265,734 - +0.4
3,265,734 - +1.9
3,265,734 - +1.2
3,265,734 - +1.7
3,265,734 - -2.1
3,265,734 - -1.2
3,265,734 - -0.4
3,265,734 - -0.6
3,265,734 - -1.1
3,265,734 - -2.8
3,265,734 - -0.5
3,265,951 + AO353_14735 0.38 -0.1
3,265,951 + AO353_14735 0.38 -0.3
3,265,951 + AO353_14735 0.38 -1.3
3,265,952 - AO353_14735 0.38 -1.3
3,265,952 - AO353_14735 0.38 -1.5
3,265,952 - AO353_14735 0.38 -1.1
3,265,960 - AO353_14735 0.40 -2.4
3,266,069 + AO353_14735 0.58 -1.2
3,266,069 + AO353_14735 0.58 -1.3
3,266,069 + AO353_14735 0.58 -2.6
3,266,070 - AO353_14735 0.58 -3.4
3,266,070 - AO353_14735 0.58 -1.3
3,266,071 + AO353_14735 0.59 -0.1
3,266,071 + AO353_14735 0.59 +2.4
3,266,294 + +1.2
3,266,294 + +0.1
3,266,294 + -0.6
3,266,294 + +0.7
3,266,294 + +0.7
3,266,294 + +0.4
3,266,295 - +0.7
3,266,295 - -0.8
3,266,295 - -1.8
3,266,295 - +0.5
3,266,295 - -1.5
3,266,295 - +0.4
3,266,304 - -0.4
3,266,304 - -0.8
3,266,304 - -1.3
3,266,312 + +0.2
3,266,312 + -0.3
3,266,313 - -0.8
3,266,323 - -0.1
3,266,323 - +1.2
3,266,334 - -1.7
3,266,335 + +1.7
3,266,335 + +0.1
3,266,335 + +1.5
3,266,335 + -0.7
3,266,335 + +0.2
3,266,335 + +0.7
3,266,335 + -0.3
3,266,335 + +2.2
3,266,336 - -1.4
3,266,336 - +1.4
3,266,336 - +0.2
3,266,336 - +0.2
3,266,336 - -1.0
3,266,389 + +0.7
3,266,390 - +2.0
3,266,434 + +1.7
3,266,435 - +0.2
3,266,435 - +2.1
3,266,435 - +0.7
3,266,435 - +0.7
3,266,491 + +2.7
3,266,491 + -0.3
3,266,509 + AO353_14740 0.11 +1.7
3,266,510 - AO353_14740 0.11 -1.3
3,266,872 + AO353_14740 0.44 +0.7
3,266,872 + AO353_14740 0.44 +0.7
3,266,872 + AO353_14740 0.44 -0.3
3,266,873 - AO353_14740 0.44 +0.2
3,266,873 - AO353_14740 0.44 +0.2
3,266,873 - AO353_14740 0.44 -3.2

Or see this region's nucleotide sequence