Experiment: L-Citrulline
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_14725 and AO353_14730 are separated by 281 nucleotides AO353_14730 and AO353_14735 are separated by 3 nucleotides AO353_14735 and AO353_14740 are separated by 73 nucleotides
AO353_14725: AO353_14725 - transcriptional regulator, at 3,264,096 to 3,264,998
_14725
AO353_14730: AO353_14730 - hypothetical protein, at 3,265,280 to 3,265,723
_14730
AO353_14735: AO353_14735 - hypothetical protein, at 3,265,727 to 3,266,314
_14735
AO353_14740: AO353_14740 - GTP-binding protein, at 3,266,388 to 3,267,488
_14740
Position (kb)
3265
3266
3267 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3264.815 kb on + strand, within AO353_14725 at 3264.815 kb on + strand, within AO353_14725 at 3264.822 kb on + strand, within AO353_14725 at 3264.822 kb on + strand, within AO353_14725 at 3264.822 kb on + strand, within AO353_14725 at 3264.822 kb on + strand, within AO353_14725 at 3264.822 kb on + strand, within AO353_14725 at 3264.822 kb on + strand, within AO353_14725 at 3264.822 kb on + strand, within AO353_14725 at 3264.822 kb on + strand, within AO353_14725 at 3264.822 kb on + strand, within AO353_14725 at 3264.822 kb on + strand, within AO353_14725 at 3264.822 kb on + strand, within AO353_14725 at 3264.822 kb on + strand, within AO353_14725 at 3264.822 kb on + strand, within AO353_14725 at 3264.822 kb on + strand, within AO353_14725 at 3264.822 kb on + strand, within AO353_14725 at 3264.822 kb on + strand, within AO353_14725 at 3264.822 kb on + strand, within AO353_14725 at 3264.822 kb on + strand, within AO353_14725 at 3264.822 kb on + strand, within AO353_14725 at 3264.823 kb on - strand, within AO353_14725 at 3264.823 kb on - strand, within AO353_14725 at 3264.823 kb on - strand, within AO353_14725 at 3264.823 kb on - strand, within AO353_14725 at 3264.823 kb on - strand, within AO353_14725 at 3264.823 kb on - strand, within AO353_14725 at 3264.823 kb on - strand, within AO353_14725 at 3264.823 kb on - strand, within AO353_14725 at 3264.823 kb on - strand, within AO353_14725 at 3264.823 kb on - strand, within AO353_14725 at 3264.823 kb on - strand, within AO353_14725 at 3264.823 kb on - strand, within AO353_14725 at 3264.823 kb on - strand, within AO353_14725 at 3264.823 kb on - strand, within AO353_14725 at 3264.823 kb on - strand, within AO353_14725 at 3264.823 kb on - strand, within AO353_14725 at 3264.823 kb on - strand, within AO353_14725 at 3264.823 kb on - strand, within AO353_14725 at 3264.828 kb on + strand, within AO353_14725 at 3264.829 kb on - strand, within AO353_14725 at 3264.829 kb on - strand, within AO353_14725 at 3264.877 kb on + strand, within AO353_14725 at 3264.878 kb on - strand, within AO353_14725 at 3264.878 kb on - strand, within AO353_14725 at 3264.878 kb on - strand, within AO353_14725 at 3264.878 kb on - strand, within AO353_14725 at 3264.918 kb on + strand at 3264.919 kb on - strand at 3264.921 kb on + strand at 3264.921 kb on + strand at 3264.921 kb on + strand at 3264.921 kb on + strand at 3264.921 kb on + strand at 3264.922 kb on - strand at 3264.922 kb on - strand at 3264.922 kb on - strand at 3264.922 kb on - strand at 3265.149 kb on + strand at 3265.149 kb on + strand at 3265.195 kb on + strand at 3265.195 kb on + strand at 3265.195 kb on + strand at 3265.195 kb on + strand at 3265.195 kb on + strand at 3265.196 kb on - strand at 3265.196 kb on - strand at 3265.209 kb on + strand at 3265.209 kb on + strand at 3265.209 kb on + strand at 3265.209 kb on + strand at 3265.209 kb on + strand at 3265.209 kb on + strand at 3265.209 kb on + strand at 3265.210 kb on - strand at 3265.210 kb on - strand at 3265.210 kb on - strand at 3265.210 kb on - strand at 3265.210 kb on - strand at 3265.238 kb on - strand at 3265.553 kb on + strand, within AO353_14730 at 3265.553 kb on + strand, within AO353_14730 at 3265.553 kb on + strand, within AO353_14730 at 3265.553 kb on + strand, within AO353_14730 at 3265.553 kb on + strand, within AO353_14730 at 3265.553 kb on + strand, within AO353_14730 at 3265.553 kb on + strand, within AO353_14730 at 3265.553 kb on + strand, within AO353_14730 at 3265.553 kb on + strand, within AO353_14730 at 3265.553 kb on + strand, within AO353_14730 at 3265.553 kb on + strand, within AO353_14730 at 3265.553 kb on + strand, within AO353_14730 at 3265.554 kb on - strand, within AO353_14730 at 3265.554 kb on - strand, within AO353_14730 at 3265.554 kb on - strand, within AO353_14730 at 3265.556 kb on + strand, within AO353_14730 at 3265.556 kb on + strand, within AO353_14730 at 3265.556 kb on + strand, within AO353_14730 at 3265.556 kb on + strand, within AO353_14730 at 3265.556 kb on + strand, within AO353_14730 at 3265.556 kb on + strand, within AO353_14730 at 3265.556 kb on + strand, within AO353_14730 at 3265.556 kb on + strand, within AO353_14730 at 3265.557 kb on - strand, within AO353_14730 at 3265.557 kb on - strand, within AO353_14730 at 3265.557 kb on - strand, within AO353_14730 at 3265.557 kb on - strand, within AO353_14730 at 3265.557 kb on - strand, within AO353_14730 at 3265.636 kb on + strand, within AO353_14730 at 3265.636 kb on + strand, within AO353_14730 at 3265.637 kb on - strand, within AO353_14730 at 3265.668 kb on + strand, within AO353_14730 at 3265.711 kb on + strand at 3265.711 kb on + strand at 3265.711 kb on + strand at 3265.711 kb on + strand at 3265.711 kb on + strand at 3265.711 kb on + strand at 3265.711 kb on + strand at 3265.712 kb on - strand at 3265.712 kb on - strand at 3265.712 kb on - strand at 3265.712 kb on - strand at 3265.712 kb on - strand at 3265.712 kb on - strand at 3265.733 kb on + strand at 3265.733 kb on + strand at 3265.733 kb on + strand at 3265.733 kb on + strand at 3265.733 kb on + strand at 3265.733 kb on + strand at 3265.733 kb on + strand at 3265.733 kb on + strand at 3265.733 kb on + strand at 3265.733 kb on + strand at 3265.733 kb on + strand at 3265.733 kb on + strand at 3265.733 kb on + strand at 3265.733 kb on + strand at 3265.734 kb on - strand at 3265.734 kb on - strand at 3265.734 kb on - strand at 3265.734 kb on - strand at 3265.734 kb on - strand at 3265.734 kb on - strand at 3265.734 kb on - strand at 3265.734 kb on - strand at 3265.734 kb on - strand at 3265.734 kb on - strand at 3265.734 kb on - strand at 3265.734 kb on - strand at 3265.734 kb on - strand at 3265.734 kb on - strand at 3265.951 kb on + strand, within AO353_14735 at 3265.951 kb on + strand, within AO353_14735 at 3265.951 kb on + strand, within AO353_14735 at 3265.952 kb on - strand, within AO353_14735 at 3265.952 kb on - strand, within AO353_14735 at 3265.952 kb on - strand, within AO353_14735 at 3265.960 kb on - strand, within AO353_14735 at 3266.069 kb on + strand, within AO353_14735 at 3266.069 kb on + strand, within AO353_14735 at 3266.069 kb on + strand, within AO353_14735 at 3266.070 kb on - strand, within AO353_14735 at 3266.070 kb on - strand, within AO353_14735 at 3266.071 kb on + strand, within AO353_14735 at 3266.071 kb on + strand, within AO353_14735 at 3266.294 kb on + strand at 3266.294 kb on + strand at 3266.294 kb on + strand at 3266.294 kb on + strand at 3266.294 kb on + strand at 3266.294 kb on + strand at 3266.295 kb on - strand at 3266.295 kb on - strand at 3266.295 kb on - strand at 3266.295 kb on - strand at 3266.295 kb on - strand at 3266.295 kb on - strand at 3266.304 kb on - strand at 3266.304 kb on - strand at 3266.304 kb on - strand at 3266.312 kb on + strand at 3266.312 kb on + strand at 3266.313 kb on - strand at 3266.323 kb on - strand at 3266.323 kb on - strand at 3266.334 kb on - strand at 3266.335 kb on + strand at 3266.335 kb on + strand at 3266.335 kb on + strand at 3266.335 kb on + strand at 3266.335 kb on + strand at 3266.335 kb on + strand at 3266.335 kb on + strand at 3266.335 kb on + strand at 3266.336 kb on - strand at 3266.336 kb on - strand at 3266.336 kb on - strand at 3266.336 kb on - strand at 3266.336 kb on - strand at 3266.389 kb on + strand at 3266.390 kb on - strand at 3266.434 kb on + strand at 3266.435 kb on - strand at 3266.435 kb on - strand at 3266.435 kb on - strand at 3266.435 kb on - strand at 3266.491 kb on + strand at 3266.491 kb on + strand at 3266.509 kb on + strand, within AO353_14740 at 3266.510 kb on - strand, within AO353_14740 at 3266.872 kb on + strand, within AO353_14740 at 3266.872 kb on + strand, within AO353_14740 at 3266.872 kb on + strand, within AO353_14740 at 3266.873 kb on - strand, within AO353_14740 at 3266.873 kb on - strand, within AO353_14740 at 3266.873 kb on - strand, within AO353_14740
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline remove 3,264,815 + AO353_14725 0.80 -3.0 3,264,815 + AO353_14725 0.80 +0.2 3,264,822 + AO353_14725 0.80 -1.8 3,264,822 + AO353_14725 0.80 +0.3 3,264,822 + AO353_14725 0.80 -1.0 3,264,822 + AO353_14725 0.80 +0.7 3,264,822 + AO353_14725 0.80 +0.9 3,264,822 + AO353_14725 0.80 +0.4 3,264,822 + AO353_14725 0.80 -0.1 3,264,822 + AO353_14725 0.80 -1.7 3,264,822 + AO353_14725 0.80 +0.2 3,264,822 + AO353_14725 0.80 +2.7 3,264,822 + AO353_14725 0.80 -0.3 3,264,822 + AO353_14725 0.80 +1.5 3,264,822 + AO353_14725 0.80 -0.8 3,264,822 + AO353_14725 0.80 -1.1 3,264,822 + AO353_14725 0.80 -2.4 3,264,822 + AO353_14725 0.80 +0.7 3,264,822 + AO353_14725 0.80 +1.8 3,264,822 + AO353_14725 0.80 +0.0 3,264,822 + AO353_14725 0.80 +0.6 3,264,823 - AO353_14725 0.81 +1.6 3,264,823 - AO353_14725 0.81 +0.2 3,264,823 - AO353_14725 0.81 -1.8 3,264,823 - AO353_14725 0.81 +0.7 3,264,823 - AO353_14725 0.81 -0.9 3,264,823 - AO353_14725 0.81 -1.3 3,264,823 - AO353_14725 0.81 -1.2 3,264,823 - AO353_14725 0.81 +0.7 3,264,823 - AO353_14725 0.81 +0.5 3,264,823 - AO353_14725 0.81 +0.1 3,264,823 - AO353_14725 0.81 -0.9 3,264,823 - AO353_14725 0.81 +1.5 3,264,823 - AO353_14725 0.81 -2.2 3,264,823 - AO353_14725 0.81 -0.0 3,264,823 - AO353_14725 0.81 -0.8 3,264,823 - AO353_14725 0.81 -0.8 3,264,823 - AO353_14725 0.81 -0.7 3,264,823 - AO353_14725 0.81 -0.0 3,264,828 + AO353_14725 0.81 -1.7 3,264,829 - AO353_14725 0.81 -0.6 3,264,829 - AO353_14725 0.81 -1.6 3,264,877 + AO353_14725 0.86 -1.6 3,264,878 - AO353_14725 0.87 -0.6 3,264,878 - AO353_14725 0.87 +1.7 3,264,878 - AO353_14725 0.87 -1.5 3,264,878 - AO353_14725 0.87 -0.5 3,264,918 + +2.3 3,264,919 - -2.4 3,264,921 + -0.6 3,264,921 + -0.3 3,264,921 + -1.4 3,264,921 + +0.2 3,264,921 + -0.3 3,264,922 - -1.0 3,264,922 - -1.3 3,264,922 - +1.8 3,264,922 - -0.3 3,265,149 + +0.5 3,265,149 + -1.3 3,265,195 + +1.5 3,265,195 + +1.1 3,265,195 + -0.3 3,265,195 + +0.5 3,265,195 + +1.7 3,265,196 - +0.4 3,265,196 - +0.0 3,265,209 + -0.3 3,265,209 + +1.3 3,265,209 + +0.7 3,265,209 + -0.8 3,265,209 + +1.1 3,265,209 + -3.0 3,265,209 + -2.1 3,265,210 - +0.2 3,265,210 - +0.7 3,265,210 - -2.0 3,265,210 - +1.1 3,265,210 - +1.8 3,265,238 - +2.2 3,265,553 + AO353_14730 0.61 -3.4 3,265,553 + AO353_14730 0.61 -2.4 3,265,553 + AO353_14730 0.61 +0.6 3,265,553 + AO353_14730 0.61 +0.2 3,265,553 + AO353_14730 0.61 -1.0 3,265,553 + AO353_14730 0.61 +0.6 3,265,553 + AO353_14730 0.61 -0.7 3,265,553 + AO353_14730 0.61 -0.4 3,265,553 + AO353_14730 0.61 +2.2 3,265,553 + AO353_14730 0.61 -0.1 3,265,553 + AO353_14730 0.61 -1.4 3,265,553 + AO353_14730 0.61 +0.7 3,265,554 - AO353_14730 0.62 -0.3 3,265,554 - AO353_14730 0.62 +2.7 3,265,554 - AO353_14730 0.62 +0.3 3,265,556 + AO353_14730 0.62 +0.2 3,265,556 + AO353_14730 0.62 -1.3 3,265,556 + AO353_14730 0.62 -1.4 3,265,556 + AO353_14730 0.62 +0.9 3,265,556 + AO353_14730 0.62 -0.8 3,265,556 + AO353_14730 0.62 +0.2 3,265,556 + AO353_14730 0.62 -0.6 3,265,556 + AO353_14730 0.62 -0.4 3,265,557 - AO353_14730 0.62 +3.5 3,265,557 - AO353_14730 0.62 +0.4 3,265,557 - AO353_14730 0.62 -1.1 3,265,557 - AO353_14730 0.62 +0.2 3,265,557 - AO353_14730 0.62 -1.0 3,265,636 + AO353_14730 0.80 +0.5 3,265,636 + AO353_14730 0.80 +2.1 3,265,637 - AO353_14730 0.80 +1.0 3,265,668 + AO353_14730 0.87 +1.3 3,265,711 + -1.6 3,265,711 + -1.6 3,265,711 + +0.6 3,265,711 + +0.1 3,265,711 + -0.3 3,265,711 + -0.0 3,265,711 + -0.8 3,265,712 - +2.0 3,265,712 - +0.2 3,265,712 - -1.6 3,265,712 - -1.7 3,265,712 - -1.8 3,265,712 - +0.3 3,265,733 + -1.4 3,265,733 + -0.4 3,265,733 + -1.0 3,265,733 + -0.3 3,265,733 + -0.4 3,265,733 + +1.4 3,265,733 + +1.1 3,265,733 + -0.3 3,265,733 + +0.2 3,265,733 + +1.2 3,265,733 + -0.0 3,265,733 + -0.7 3,265,733 + -0.5 3,265,733 + +0.7 3,265,734 - -1.1 3,265,734 - +0.0 3,265,734 - +0.7 3,265,734 - +0.4 3,265,734 - +1.9 3,265,734 - +1.2 3,265,734 - +1.7 3,265,734 - -2.1 3,265,734 - -1.2 3,265,734 - -0.4 3,265,734 - -0.6 3,265,734 - -1.1 3,265,734 - -2.8 3,265,734 - -0.5 3,265,951 + AO353_14735 0.38 -0.1 3,265,951 + AO353_14735 0.38 -0.3 3,265,951 + AO353_14735 0.38 -1.3 3,265,952 - AO353_14735 0.38 -1.3 3,265,952 - AO353_14735 0.38 -1.5 3,265,952 - AO353_14735 0.38 -1.1 3,265,960 - AO353_14735 0.40 -2.4 3,266,069 + AO353_14735 0.58 -1.2 3,266,069 + AO353_14735 0.58 -1.3 3,266,069 + AO353_14735 0.58 -2.6 3,266,070 - AO353_14735 0.58 -3.4 3,266,070 - AO353_14735 0.58 -1.3 3,266,071 + AO353_14735 0.59 -0.1 3,266,071 + AO353_14735 0.59 +2.4 3,266,294 + +1.2 3,266,294 + +0.1 3,266,294 + -0.6 3,266,294 + +0.7 3,266,294 + +0.7 3,266,294 + +0.4 3,266,295 - +0.7 3,266,295 - -0.8 3,266,295 - -1.8 3,266,295 - +0.5 3,266,295 - -1.5 3,266,295 - +0.4 3,266,304 - -0.4 3,266,304 - -0.8 3,266,304 - -1.3 3,266,312 + +0.2 3,266,312 + -0.3 3,266,313 - -0.8 3,266,323 - -0.1 3,266,323 - +1.2 3,266,334 - -1.7 3,266,335 + +1.7 3,266,335 + +0.1 3,266,335 + +1.5 3,266,335 + -0.7 3,266,335 + +0.2 3,266,335 + +0.7 3,266,335 + -0.3 3,266,335 + +2.2 3,266,336 - -1.4 3,266,336 - +1.4 3,266,336 - +0.2 3,266,336 - +0.2 3,266,336 - -1.0 3,266,389 + +0.7 3,266,390 - +2.0 3,266,434 + +1.7 3,266,435 - +0.2 3,266,435 - +2.1 3,266,435 - +0.7 3,266,435 - +0.7 3,266,491 + +2.7 3,266,491 + -0.3 3,266,509 + AO353_14740 0.11 +1.7 3,266,510 - AO353_14740 0.11 -1.3 3,266,872 + AO353_14740 0.44 +0.7 3,266,872 + AO353_14740 0.44 +0.7 3,266,872 + AO353_14740 0.44 -0.3 3,266,873 - AO353_14740 0.44 +0.2 3,266,873 - AO353_14740 0.44 +0.2 3,266,873 - AO353_14740 0.44 -3.2
Or see this region's nucleotide sequence