Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_05400

Experiment: L-Citrulline

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Citrulline
1,189,600	-				-0.3
1,189,754	+		AO353_05395	0.18	+4.2
1,189,754	+		AO353_05395	0.18	-1.7
1,189,754	+		AO353_05395	0.18	-0.3
1,189,754	+		AO353_05395	0.18	-1.5
1,189,754	+				-0.3
1,189,755	-		AO353_05395	0.18	-2.4
1,189,755	-		AO353_05395	0.18	-1.5
1,189,755	-		AO353_05395	0.18	+0.7
1,189,763	+		AO353_05395	0.19	-0.3
1,189,772	+		AO353_05395	0.20	-1.5
1,189,772	+		AO353_05395	0.20	+0.1
1,189,773	-		AO353_05395	0.20	-0.3
1,189,773	-		AO353_05395	0.20	-2.1
1,189,773	-		AO353_05395	0.20	-0.5
1,189,773	-		AO353_05395	0.20	+0.7
1,189,773	-		AO353_05395	0.20	-0.8
1,189,773	-		AO353_05395	0.20	-0.6
1,189,773	-		AO353_05395	0.20	+2.3
1,189,830	+		AO353_05395	0.26	+1.0
1,190,084	+		AO353_05395	0.51	+0.9
1,190,084	+		AO353_05395	0.51	-1.6
1,190,084	+		AO353_05395	0.51	+0.4
1,190,084	+		AO353_05395	0.51	-2.1
1,190,084	+		AO353_05395	0.51	+1.5
1,190,084	+		AO353_05395	0.51	-0.3
1,190,084	+		AO353_05395	0.51	-0.0
1,190,085	-		AO353_05395	0.51	-0.1
1,190,085	-		AO353_05395	0.51	-0.6
1,190,264	+		AO353_05395	0.69	-0.5
1,190,264	+		AO353_05395	0.69	+0.1
1,190,264	+		AO353_05395	0.69	+0.0
1,190,264	+		AO353_05395	0.69	-0.6
1,190,264	+		AO353_05395	0.69	+0.4
1,190,264	+		AO353_05395	0.69	-1.3
1,190,264	+		AO353_05395	0.69	+2.5
1,190,265	-		AO353_05395	0.69	-2.7
1,190,265	-		AO353_05395	0.69	+0.5
1,190,265	-		AO353_05395	0.69	-0.3
1,190,265	-		AO353_05395	0.69	-1.0
1,190,265	-		AO353_05395	0.69	-0.3
1,190,265	-		AO353_05395	0.69	+3.3
1,190,308	-		AO353_05395	0.73	-2.7
1,190,364	+		AO353_05395	0.79	-1.1
1,190,465	+		AO353_05395	0.89	-2.5
1,190,465	+		AO353_05395	0.89	+0.7
1,190,527	-				+0.6
1,190,533	+				-1.7
1,190,534	-				-2.0
1,190,540	+				-0.5
1,190,541	-				-1.3
1,190,584	+				-2.1
1,190,584	+				-0.5
1,190,584	+				+0.8
1,190,584	+				-0.3
1,190,584	+				+0.1
1,190,584	+				-1.5
1,190,585	-				-0.7
1,190,585	-				-2.5
1,190,588	+				-1.6
1,190,588	+				+0.4
1,190,588	+				-0.9
1,190,588	+				+4.5
1,190,588	+				+0.3
1,190,588	+				-0.3
1,190,588	+				+0.7
1,190,588	+				-1.5
1,190,588	+				+0.9
1,190,588	+				+2.6
1,190,588	+				+0.7
1,190,588	+				+1.2
1,190,588	+				+0.0
1,190,588	+				-1.5
1,190,588	+				-1.0
1,190,588	+				-1.0
1,190,588	+				-0.5
1,190,588	+				-2.4
1,190,588	+				+1.1
1,190,588	+				+0.6
1,190,588	+				-0.4
1,190,588	+				+1.5
1,190,589	-				+1.4
1,190,589	-				+2.0
1,190,589	-				+1.5
1,190,589	-				+0.0
1,190,589	-				-1.1
1,190,589	-				-0.9
1,190,589	-				+0.4
1,190,589	-				-0.8
1,190,589	-				-1.4
1,190,589	-				+0.6
1,190,589	-				-1.1
1,190,589	-				+0.3
1,190,589	-				-1.0
1,190,589	-				-0.3
1,190,589	-				-1.5
1,190,589	-				-0.5
1,190,589	-				-1.5
1,190,589	-				-0.9
1,190,589	-				+2.7
1,190,589	-				+0.7
1,190,594	+				+0.0
1,190,594	+				-1.3
1,190,594	+				-1.7
1,190,595	-				-1.1
1,190,595	-				+1.1
1,190,603	+				+0.9
1,190,646	+				+0.3
1,190,646	+				-0.3
1,190,646	+				-2.5
1,190,647	-				-2.2
1,190,647	-				-1.6
1,191,117	+		AO353_05400	0.58	-1.3
1,191,117	+		AO353_05400	0.58	-0.6
1,191,117	+		AO353_05400	0.58	-1.1
1,191,117	+		AO353_05400	0.58	+0.1
1,191,118	-		AO353_05400	0.58	+0.8
1,191,118	-		AO353_05400	0.58	-1.1
1,191,118	-		AO353_05400	0.58	+0.7
1,191,118	-		AO353_05400	0.58	-0.9
1,191,118	-		AO353_05400	0.58	-0.3
1,191,118	-		AO353_05400	0.58	+1.3
1,191,165	+		AO353_05400	0.63	-3.2
1,191,165	+		AO353_05400	0.63	+1.4
1,191,166	-		AO353_05400	0.63	+1.5
1,191,166	-		AO353_05400	0.63	-0.9
1,191,166	-		AO353_05400	0.63	-0.9
1,191,166	-		AO353_05400	0.63	-1.5
1,191,166	-		AO353_05400	0.63	+1.7
1,191,166	-		AO353_05400	0.63	+0.4
1,191,166	-		AO353_05400	0.63	-1.1
1,191,322	+		AO353_05400	0.80	-2.0
1,191,322	+		AO353_05400	0.80	-0.0
1,191,322	+		AO353_05400	0.80	-0.9
1,191,323	-		AO353_05400	0.80	-0.6
1,191,323	-		AO353_05400	0.80	-1.1
1,191,323	-		AO353_05400	0.80	-2.3
1,191,323	-		AO353_05400	0.80	+0.2
1,191,323	-		AO353_05400	0.80	-2.1
1,191,373	-		AO353_05400	0.86	-2.1
1,191,373	-		AO353_05400	0.86	-1.6
1,191,824	-		AO353_05405	0.32	-0.5
1,191,824	-		AO353_05405	0.32	-1.1
1,191,851	+		AO353_05405	0.35	-2.2
1,191,852	-		AO353_05405	0.35	-2.7
1,191,852	-		AO353_05405	0.35	+2.7
1,191,852	-		AO353_05405	0.35	-0.9
1,191,852	-		AO353_05405	0.35	+0.9
1,191,852	-		AO353_05405	0.35	-0.3
1,192,178	+		AO353_05405	0.69	-1.1
1,192,178	+		AO353_05405	0.69	-0.3
1,192,178	+		AO353_05405	0.69	+0.1
1,192,178	+		AO353_05405	0.69	+0.5
1,192,179	-		AO353_05405	0.69	-1.3
1,192,189	+		AO353_05405	0.70	-0.3
1,192,189	+		AO353_05405	0.70	+0.4
1,192,189	+		AO353_05405	0.70	-2.5
1,192,189	+		AO353_05405	0.70	+0.3
1,192,189	+		AO353_05405	0.70	-1.7
1,192,189	+		AO353_05405	0.70	-2.0
1,192,190	-		AO353_05405	0.70	+0.2
1,192,190	-		AO353_05405	0.70	-2.9
1,192,190	-		AO353_05405	0.70	-0.3
1,192,190	-		AO353_05405	0.70	-0.6
1,192,190	-		AO353_05405	0.70	-0.3
1,192,190	-		AO353_05405	0.70	-0.5
1,192,190	-		AO353_05405	0.70	-0.6
1,192,205	+		AO353_05405	0.72	-3.0
1,192,206	-		AO353_05405	0.72	+0.7
1,192,206	-		AO353_05405	0.72	-0.9
1,192,252	+		AO353_05405	0.76	-2.0
1,192,252	+		AO353_05405	0.76	-1.1
1,192,276	-		AO353_05405	0.79	+0.9
1,192,381	+		AO353_05405	0.90	-0.1
1,192,381	+		AO353_05405	0.90	-1.9
1,192,382	-		AO353_05405	0.90	-1.0
1,192,382	-		AO353_05405	0.90	-2.1
1,192,453	+				-0.7
1,192,453	+				-0.9
1,192,453	+				-0.4
1,192,453	+				+0.3
1,192,454	-				-1.2
1,192,454	-				+0.0
1,192,454	-				-1.5
1,192,454	-				-1.6
1,192,454	-				+2.6
1,192,477	+				-0.2
1,192,477	+				-1.3