Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS11710

Experiment: L-Glutamine (C)(N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Glutamine (C)(N); with TAPS
2,596,442	+		PFLU_RS11700	0.87	-1.5
2,596,442	+		PFLU_RS11700	0.87	-0.4
2,596,442	+		PFLU_RS11700	0.87	-1.5
2,596,442	+		PFLU_RS11700	0.87	+0.1
2,596,443	-		PFLU_RS11700	0.88	+0.7
2,596,443	-		PFLU_RS11700	0.88	+0.8
2,596,443	-		PFLU_RS11700	0.88	-0.7
2,596,443	-		PFLU_RS11700	0.88	+1.8
2,596,443	-		PFLU_RS11700	0.88	+1.7
2,596,443	-		PFLU_RS11700	0.88	-1.5
2,596,455	+		PFLU_RS11700	0.89	+0.1
2,596,455	+		PFLU_RS11700	0.89	+1.5
2,596,455	+		PFLU_RS11700	0.89	+0.4
2,596,455	+		PFLU_RS11700	0.89	+3.6
2,596,548	-				+1.0
2,596,557	+				-2.1
2,596,557	+				-1.0
2,596,558	-				-1.0
2,596,558	-				-2.1
2,596,558	-				+1.7
2,596,572	+				+1.1
2,596,572	+				+0.4
2,596,572	+				-2.1
2,596,572	+				-1.0
2,596,573	-				-1.5
2,596,573	-				-1.0
2,596,573	-				+0.2
2,596,573	-				+1.7
2,596,573	-				+1.3
2,596,578	+				+0.4
2,596,578	+				+0.1
2,596,578	+				-1.8
2,596,579	-				-0.6
2,596,579	-				-0.4
2,596,579	-				-1.0
2,596,579	-				-1.7
2,596,579	-				-2.7
2,596,579	-				+1.6
2,596,580	+				+1.5
2,596,580	+				-0.1
2,596,580	+				+3.3
2,596,580	+				+0.0
2,596,580	+				-0.4
2,596,581	-				+0.3
2,596,581	-				-0.2
2,596,581	-				-2.2
2,596,581	-				+1.0
2,596,581	-				+0.4
2,596,581	-				+1.3
2,596,581	-				-1.6
2,596,581	-				+2.0
2,596,581	-				-1.6
2,596,581	-				-1.8
2,596,821	+		PFLU_RS11705	0.31	-0.6
2,596,821	+		PFLU_RS11705	0.31	-1.0
2,596,821	+		PFLU_RS11705	0.31	-0.4
2,597,197	+		PFLU_RS11705	0.79	-0.8
2,597,197	+		PFLU_RS11705	0.79	+0.0
2,597,197	+		PFLU_RS11705	0.79	-0.0
2,597,198	-		PFLU_RS11705	0.80	-1.0
2,597,198	-		PFLU_RS11705	0.80	-0.3
2,597,198	-		PFLU_RS11705	0.80	-0.6
2,597,198	-		PFLU_RS11705	0.80	+0.2
2,597,198	-		PFLU_RS11705	0.80	-1.4
2,597,198	-		PFLU_RS11705	0.80	+0.3
2,597,281	+				+0.6
2,597,281	+				+1.6
2,597,281	+				+1.0
2,597,281	+				+1.7
2,597,281	+				+0.6
2,597,282	-				+0.0
2,597,288	+				-1.9
2,597,289	-				-2.1
2,597,356	+				-0.4
2,597,356	+				-2.3
2,597,357	-				-0.4
2,597,357	-				+2.6
2,597,357	-				-1.6
2,597,357	-				+0.2
2,597,357	-				-0.3
2,597,357	-				+1.9
2,597,357	-				+0.4
2,597,495	+		PFLU_RS11710	0.14	-3.3
2,597,495	+		PFLU_RS11710	0.14	+1.0
2,597,496	-		PFLU_RS11710	0.14	+2.0
2,597,496	-		PFLU_RS11710	0.14	+1.9
2,597,496	-		PFLU_RS11710	0.14	-1.8
2,597,496	-		PFLU_RS11710	0.14	+2.5
2,597,496	-		PFLU_RS11710	0.14	-0.4
2,597,496	-		PFLU_RS11710	0.14	-1.1
2,597,558	+		PFLU_RS11710	0.20	-1.2
2,597,559	-		PFLU_RS11710	0.20	+3.1
2,597,559	-		PFLU_RS11710	0.20	-0.3
2,597,636	+		PFLU_RS11710	0.28	+0.9
2,597,636	+		PFLU_RS11710	0.28	-2.4
2,597,642	+		PFLU_RS11710	0.29	+2.3
2,597,643	-		PFLU_RS11710	0.29	-0.6
2,597,643	-		PFLU_RS11710	0.29	-0.2
2,597,643	-		PFLU_RS11710	0.29	-2.9
2,597,643	-		PFLU_RS11710	0.29	+0.8
2,597,643	-		PFLU_RS11710	0.29	-0.0
2,597,768	+		PFLU_RS11710	0.41	+1.5
2,597,768	+		PFLU_RS11710	0.41	+1.1
2,597,768	+		PFLU_RS11710	0.41	-0.8
2,597,769	-		PFLU_RS11710	0.41	-1.5
2,597,769	-		PFLU_RS11710	0.41	-2.0
2,597,769	-		PFLU_RS11710	0.41	-0.6
2,597,769	-		PFLU_RS11710	0.41	+0.2
2,597,769	-		PFLU_RS11710	0.41	+0.1
2,597,769	-		PFLU_RS11710	0.41	+0.4
2,597,801	+		PFLU_RS11710	0.45	+1.1
2,598,142	+		PFLU_RS11710	0.79	-0.5
2,598,142	+		PFLU_RS11710	0.79	-1.7
2,598,142	+		PFLU_RS11710	0.79	+0.8
2,598,142	+		PFLU_RS11710	0.79	+1.5
2,598,143	-		PFLU_RS11710	0.79	+2.0
2,598,143	-		PFLU_RS11710	0.79	-0.7
2,598,188	+		PFLU_RS11710	0.83	-0.1
2,598,188	+		PFLU_RS11710	0.83	+0.4
2,598,189	-		PFLU_RS11710	0.83	+1.8
2,598,351	+				-0.8
2,598,351	+				-0.0
2,598,351	+				-0.4
2,598,351	+				-0.3
2,598,351	+				+1.1
2,598,351	+				-0.4
2,598,362	+				+0.4
2,598,376	+				-0.1
2,598,447	+				+0.9
2,598,503	+				+1.2
2,598,504	-				-0.8
2,598,504	-				+0.6
2,598,577	+				-1.0
2,598,577	+				+1.6
2,598,578	-				+1.1
2,598,578	-				-2.0
2,598,751	+		PFLU_RS11715	0.11	+1.0
2,598,847	+		PFLU_RS11715	0.15	+1.0
2,598,847	+		PFLU_RS11715	0.15	-1.7
2,598,847	+		PFLU_RS11715	0.15	-2.6
2,598,847	+		PFLU_RS11715	0.15	-2.6
2,598,847	+		PFLU_RS11715	0.15	-0.9
2,598,847	+		PFLU_RS11715	0.15	-1.4
2,598,848	-		PFLU_RS11715	0.15	-0.7
2,598,848	-		PFLU_RS11715	0.15	-1.0
2,598,873	+		PFLU_RS11715	0.17	+1.1
2,598,873	+		PFLU_RS11715	0.17	-2.1
2,598,873	+		PFLU_RS11715	0.17	-0.8
2,598,898	+		PFLU_RS11715	0.18	+0.6
2,598,898	+		PFLU_RS11715	0.18	-3.0
2,598,898	+		PFLU_RS11715	0.18	-0.4
2,598,898	+		PFLU_RS11715	0.18	+2.1
2,598,898	+		PFLU_RS11715	0.18	-0.0
2,598,899	-		PFLU_RS11715	0.18	-0.6
2,598,899	-		PFLU_RS11715	0.18	+1.5
2,598,899	-		PFLU_RS11715	0.18	+0.3
2,598,950	+		PFLU_RS11715	0.21	+1.1
2,599,000	+		PFLU_RS11715	0.23	+2.2
2,599,000	+		PFLU_RS11715	0.23	+0.8
2,599,000	+		PFLU_RS11715	0.23	-1.4
2,599,000	+		PFLU_RS11715	0.23	-1.6
2,599,000	+		PFLU_RS11715	0.23	-1.6
2,599,000	+		PFLU_RS11715	0.23	-2.6
2,599,000	+		PFLU_RS11715	0.23	-1.7
2,599,001	-		PFLU_RS11715	0.23	-0.0
2,599,001	-		PFLU_RS11715	0.23	+1.2
2,599,001	-		PFLU_RS11715	0.23	+1.2
2,599,001	-		PFLU_RS11715	0.23	-1.4
2,599,141	-		PFLU_RS11715	0.30	-0.0
2,599,141	-		PFLU_RS11715	0.30	-0.6
2,599,291	+		PFLU_RS11715	0.38	-1.6