Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_27475

Experiment: L-Ornithine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Ornithine
5,995,611	+				-1.1
5,995,612	-				+0.1
5,995,612	-				+0.8
5,995,613	+				-0.8
5,995,614	-				-1.1
5,995,629	-				-2.0
5,995,653	-				+1.3
5,995,683	+				+0.2
5,995,705	-				-0.4
5,995,705	-				+1.8
5,995,705	-				-2.6
5,995,708	+				-0.1
5,995,708	+				-1.1
5,995,708	+				-2.1
5,995,709	-				-1.7
5,995,709	-				-1.7
5,995,709	-				-2.8
5,995,709	-				+0.6
5,995,760	+				-0.5
5,995,760	+				-1.3
5,995,761	-				+0.5
5,995,796	-				-0.8
5,995,809	+				-1.3
5,995,809	+				+0.3
5,995,809	+				-0.3
5,995,810	-				-1.7
5,995,832	-				+0.6
5,995,837	+				+2.8
5,995,837	+				+0.9
5,995,838	-				+2.6
5,995,838	-				+0.2
5,995,838	-				-2.8
5,995,846	-				+0.3
5,995,914	+		AO353_27470	0.11	+0.3
5,995,915	-		AO353_27470	0.11	-1.3
5,995,929	-		AO353_27470	0.13	+1.5
5,995,929	-		AO353_27470	0.13	-0.8
5,995,929	-		AO353_27470	0.13	-0.6
5,995,949	+		AO353_27470	0.16	+0.5
5,995,949	+		AO353_27470	0.16	-0.8
5,995,950	-		AO353_27470	0.17	-1.5
5,995,950	-		AO353_27470	0.17	+0.7
5,995,950	-		AO353_27470	0.17	-2.2
5,996,030	+		AO353_27470	0.28	+2.1
5,996,031	-		AO353_27470	0.29	+1.5
5,996,031	-		AO353_27470	0.29	+0.3
5,996,031	-		AO353_27470	0.29	-2.0
5,996,031	-		AO353_27470	0.29	-1.6
5,996,063	+		AO353_27470	0.33	+2.3
5,996,123	+		AO353_27470	0.42	+0.8
5,996,123	+		AO353_27470	0.42	+0.5
5,996,123	+		AO353_27470	0.42	+1.5
5,996,124	-		AO353_27470	0.42	+1.1
5,996,124	-		AO353_27470	0.42	+1.5
5,996,124	-		AO353_27470	0.42	+0.1
5,996,124	-		AO353_27470	0.42	-0.8
5,996,124	-		AO353_27470	0.42	-1.3
5,996,124	-		AO353_27470	0.42	-0.1
5,996,124	-		AO353_27470	0.42	-1.7
5,996,162	+		AO353_27470	0.48	+2.5
5,996,162	+		AO353_27470	0.48	+1.9
5,996,162	+		AO353_27470	0.48	+0.9
5,996,162	+		AO353_27470	0.48	-0.8
5,996,163	-		AO353_27470	0.48	+1.2
5,996,163	-		AO353_27470	0.48	+2.5
5,996,163	-		AO353_27470	0.48	-1.1
5,996,163	-		AO353_27470	0.48	-2.5
5,996,217	+				+1.5
5,996,268	-		AO353_27470	0.64	-1.8
5,996,295	+		AO353_27470	0.68	+0.7
5,996,295	+		AO353_27470	0.68	+0.3
5,996,296	-		AO353_27470	0.68	-0.8
5,996,296	-		AO353_27470	0.68	-2.7
5,996,345	+		AO353_27470	0.75	-0.4
5,996,345	+		AO353_27470	0.75	-0.4
5,996,345	+		AO353_27470	0.75	+1.9
5,996,346	-		AO353_27470	0.75	-0.8
5,996,346	-		AO353_27470	0.75	-1.3
5,996,431	+		AO353_27470	0.88	+1.5
5,996,431	+		AO353_27470	0.88	-1.5
5,996,431	+		AO353_27470	0.88	+0.6
5,996,431	+		AO353_27470	0.88	+0.2
5,996,432	-		AO353_27470	0.88	-0.5
5,996,432	-		AO353_27470	0.88	+0.7
5,996,521	+				-1.1
5,996,521	+				-2.1
5,996,521	+				+0.4
5,996,521	+				+1.8
5,996,568	+				-1.3
5,996,569	-				+0.1
5,996,602	+				-1.1
5,996,602	+				+1.1
5,996,603	-				+1.3
5,996,637	+				-0.3
5,996,637	+				-1.1
5,996,637	+				+2.5
5,996,638	-				+0.1
5,996,638	-				+0.7
5,996,638	-				+1.3
5,996,826	+		AO353_27475	0.20	+1.3
5,996,827	-		AO353_27475	0.20	-2.0
5,997,093	+		AO353_27475	0.39	-1.4
5,997,094	-		AO353_27475	0.40	-1.7
5,997,094	-		AO353_27475	0.40	-0.7
5,997,094	-		AO353_27475	0.40	+0.8
5,997,094	-		AO353_27475	0.40	-1.1
5,997,138	+		AO353_27475	0.43	+1.2
5,997,138	+		AO353_27475	0.43	+1.0
5,997,138	+		AO353_27475	0.43	-0.0
5,997,138	+		AO353_27475	0.43	+2.1
5,997,139	-		AO353_27475	0.43	-1.7
5,997,451	+		AO353_27475	0.66	+1.5
5,997,462	+		AO353_27475	0.67	-0.0
5,997,462	+		AO353_27475	0.67	-0.8
5,997,462	+		AO353_27475	0.67	+1.1
5,997,462	+		AO353_27475	0.67	+1.4
5,997,462	+		AO353_27475	0.67	+2.5
5,997,462	+				-0.1
5,997,463	-		AO353_27475	0.67	+0.5
5,997,463	-		AO353_27475	0.67	+1.4
5,997,463	-		AO353_27475	0.67	-2.2
5,997,463	-		AO353_27475	0.67	-1.2
5,997,496	+		AO353_27475	0.69	-0.4
5,997,496	+		AO353_27475	0.69	-0.6
5,997,496	+		AO353_27475	0.69	+0.9
5,997,497	-		AO353_27475	0.69	-0.8
5,997,497	-		AO353_27475	0.69	-0.7
5,997,497	-		AO353_27475	0.69	-1.1
5,997,497	-		AO353_27475	0.69	-1.5
5,997,497	-		AO353_27475	0.69	+0.3
5,997,673	+		AO353_27475	0.83	-0.2
5,997,673	+		AO353_27475	0.83	-1.6
5,997,681	+		AO353_27475	0.83	-0.1
5,997,799	-				-0.1
5,997,838	-				+0.4
5,997,838	-				-0.5
5,997,923	+				+0.8
5,997,923	+				-1.1
5,997,923	+				-1.1
5,997,923	+				-1.1
5,997,924	-				-1.4
5,997,924	-				-0.1
5,997,924	-				+1.4
5,997,924	-				-1.3
5,997,929	+				+0.1
5,997,929	+				+1.5
5,997,938	+				-1.1
5,997,939	-				-1.0
5,998,015	-		AO353_27480	0.15	-0.7
5,998,085	+		AO353_27480	0.28	+1.1
5,998,085	+		AO353_27480	0.28	+0.5
5,998,085	+		AO353_27480	0.28	-1.7
5,998,086	-		AO353_27480	0.28	+2.0
5,998,204	-		AO353_27480	0.49	+0.6
5,998,204	-		AO353_27480	0.49	+0.5
5,998,217	+		AO353_27480	0.51	-2.1
5,998,218	-		AO353_27480	0.51	-0.2
5,998,218	-		AO353_27480	0.51	-0.7
5,998,220	+		AO353_27480	0.52	-0.5
5,998,220	+		AO353_27480	0.52	-1.2
5,998,221	-		AO353_27480	0.52	-1.3
5,998,284	-		AO353_27480	0.63	-1.1
5,998,289	+		AO353_27480	0.64	-0.5
5,998,289	+		AO353_27480	0.64	-2.7
5,998,290	-		AO353_27480	0.64	+0.6
5,998,290	-		AO353_27480	0.64	-1.3
5,998,421	+		AO353_27480	0.88	-0.7
5,998,421	+		AO353_27480	0.88	+1.1
5,998,421	+		AO353_27480	0.88	+0.3
5,998,422	-		AO353_27480	0.88	-0.0
5,998,422	-		AO353_27480	0.88	-0.5
5,998,422	-		AO353_27480	0.88	-2.0
5,998,494	+				+0.8
5,998,494	+				-2.1
5,998,575	+				-0.5
5,998,575	+				+1.8
5,998,575	+				-0.8
5,998,576	-				-0.1
5,998,576	-				+0.2
5,998,579	+				-0.1
5,998,580	-				-2.0
5,998,614	+				-0.7
5,998,614	+				+0.3
5,998,615	-				+2.5
5,998,615	-				+0.9
5,998,615	-				-0.8
5,998,701	+		AO353_27485	0.14	+1.0
5,998,702	-		AO353_27485	0.15	-0.8
5,998,830	+		AO353_27485	0.24	+0.2
5,998,831	-		AO353_27485	0.25	+1.5
5,998,831	-		AO353_27485	0.25	-0.2
5,998,875	+		AO353_27485	0.28	-0.7
5,998,875	+		AO353_27485	0.28	-1.2
5,998,875	+		AO353_27485	0.28	-0.5
5,998,875	+		AO353_27485	0.28	+0.3
5,998,876	-		AO353_27485	0.28	-0.2
5,998,876	-		AO353_27485	0.28	+1.7
5,998,876	-		AO353_27485	0.28	+1.5
5,998,876	-		AO353_27485	0.28	-1.7