Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS28965

Experiment: Glucose (C) and Ammonium chloride (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and Ammonium chloride (N); with TAPS
6,437,847	+				-0.6
6,437,863	+				+1.6
6,437,864	-				+1.1
6,437,864	-				+1.0
6,437,864	-				-1.0
6,437,864	-				+0.2
6,437,877	+				-1.2
6,437,877	+				-0.5
6,437,877	+				-0.1
6,437,878	-				-0.1
6,437,878	-				-1.2
6,437,900	+				-0.9
6,437,901	-				-2.3
6,437,901	-				-0.1
6,437,901	-				-0.0
6,437,901	-				-2.4
6,437,915	+				-0.6
6,437,915	+				+0.4
6,437,915	+				-1.8
6,437,915	+				+1.6
6,437,916	-				-1.0
6,437,916	-				-0.1
6,437,916	-				+1.1
6,437,916	-				-2.0
6,437,916	-				+0.6
6,437,921	-				+1.5
6,437,935	+				+1.3
6,437,935	+				-1.2
6,437,935	+				-0.4
6,437,935	+				-0.5
6,437,935	+				-0.2
6,437,935	+				-0.2
6,437,936	-				+1.4
6,437,936	-				-1.0
6,437,936	-				-1.2
6,437,936	-				-0.7
6,437,936	-				+0.6
6,437,936	-				+0.6
6,437,936	-				+1.5
6,437,936	-				-0.2
6,437,944	+				+0.5
6,437,944	+				-1.5
6,437,945	-				+0.7
6,437,945	-				-1.0
6,438,054	+		PFLU_RS28955	0.22	-1.3
6,438,054	+		PFLU_RS28955	0.22	-0.6
6,438,054	+		PFLU_RS28955	0.22	-3.1
6,438,054	+		PFLU_RS28955	0.22	-0.6
6,438,054	+		PFLU_RS28955	0.22	-0.2
6,438,055	-		PFLU_RS28955	0.22	-1.0
6,438,055	-		PFLU_RS28955	0.22	-0.4
6,438,055	-		PFLU_RS28955	0.22	-0.3
6,438,055	-		PFLU_RS28955	0.22	-0.2
6,438,055	-		PFLU_RS28955	0.22	+0.4
6,438,055	-		PFLU_RS28955	0.22	+0.2
6,438,055	-		PFLU_RS28955	0.22	-1.1
6,438,058	+		PFLU_RS28955	0.24	-1.2
6,438,058	+		PFLU_RS28955	0.24	-1.4
6,438,059	-		PFLU_RS28955	0.24	+0.8
6,438,059	-		PFLU_RS28955	0.24	+0.5
6,438,076	+		PFLU_RS28955	0.32	+0.2
6,438,076	+		PFLU_RS28955	0.32	-2.6
6,438,076	+		PFLU_RS28955	0.32	-0.2
6,438,076	+		PFLU_RS28955	0.32	-0.1
6,438,076	+		PFLU_RS28955	0.32	+0.7
6,438,076	+		PFLU_RS28955	0.32	+1.8
6,438,076	+		PFLU_RS28955	0.32	-0.8
6,438,077	-		PFLU_RS28955	0.33	+0.2
6,438,077	-		PFLU_RS28955	0.33	+0.8
6,438,077	-		PFLU_RS28955	0.33	-1.6
6,438,077	-		PFLU_RS28955	0.33	-1.0
6,438,077	-		PFLU_RS28955	0.33	+0.6
6,438,077	-		PFLU_RS28955	0.33	-0.0
6,438,077	-		PFLU_RS28955	0.33	-0.8
6,438,077	-		PFLU_RS28955	0.33	+0.9
6,438,077	-		PFLU_RS28955	0.33	-1.1
6,438,096	+		PFLU_RS28955	0.42	+0.1
6,438,096	+		PFLU_RS28955	0.42	+2.0
6,438,096	+		PFLU_RS28955	0.42	-0.0
6,438,096	+		PFLU_RS28955	0.42	+0.6
6,438,096	+		PFLU_RS28955	0.42	-0.2
6,438,096	+		PFLU_RS28955	0.42	-0.0
6,438,096	+		PFLU_RS28955	0.42	+1.8
6,438,096	+		PFLU_RS28955	0.42	-1.1
6,438,096	+		PFLU_RS28955	0.42	+0.2
6,438,096	+		PFLU_RS28955	0.42	-0.8
6,438,096	+		PFLU_RS28955	0.42	-0.0
6,438,096	+		PFLU_RS28955	0.42	-1.1
6,438,096	+		PFLU_RS28955	0.42	-0.2
6,438,097	-		PFLU_RS28955	0.42	-2.5
6,438,097	-		PFLU_RS28955	0.42	-1.5
6,438,097	-		PFLU_RS28955	0.42	-0.1
6,438,097	-		PFLU_RS28955	0.42	-0.2
6,438,097	-		PFLU_RS28955	0.42	+1.0
6,438,097	-		PFLU_RS28955	0.42	+1.2
6,438,097	-		PFLU_RS28955	0.42	-0.6
6,438,097	-		PFLU_RS28955	0.42	+0.4
6,438,097	-		PFLU_RS28955	0.42	-1.9
6,438,099	+		PFLU_RS28955	0.43	-0.0
6,438,099	+		PFLU_RS28955	0.43	+0.0
6,438,099	+		PFLU_RS28955	0.43	-0.6
6,438,099	+		PFLU_RS28955	0.43	+0.7
6,438,099	+		PFLU_RS28955	0.43	+1.2
6,438,099	+		PFLU_RS28955	0.43	+0.9
6,438,099	+		PFLU_RS28955	0.43	-1.5
6,438,099	+		PFLU_RS28955	0.43	+0.5
6,438,099	+		PFLU_RS28955	0.43	+1.4
6,438,100	-		PFLU_RS28955	0.44	+0.1
6,438,100	-		PFLU_RS28955	0.44	+0.9
6,438,100	-		PFLU_RS28955	0.44	+0.6
6,438,100	-		PFLU_RS28955	0.44	-1.8
6,438,100	-		PFLU_RS28955	0.44	+0.4
6,438,100	-		PFLU_RS28955	0.44	+1.8
6,438,100	-		PFLU_RS28955	0.44	+1.2
6,438,100	-		PFLU_RS28955	0.44	+0.4
6,438,228	+				+1.1
6,438,228	+				+2.0
6,438,228	+				-3.6
6,438,229	-				+2.1
6,438,229	-				-0.0
6,438,259	+		PFLU_RS28960	0.14	-0.1
6,438,259	+		PFLU_RS28960	0.14	-1.1
6,438,259	+		PFLU_RS28960	0.14	-0.5
6,438,259	+		PFLU_RS28960	0.14	-0.4
6,438,260	-		PFLU_RS28960	0.14	+1.3
6,438,260	-		PFLU_RS28960	0.14	+1.1
6,438,260	-		PFLU_RS28960	0.14	+0.6
6,438,260	-		PFLU_RS28960	0.14	+2.7
6,438,313	+		PFLU_RS28960	0.31	+0.3
6,438,417	+		PFLU_RS28960	0.64	+1.6
6,438,417	+		PFLU_RS28960	0.64	-0.4
6,438,417	+		PFLU_RS28960	0.64	+0.8
6,438,417	+		PFLU_RS28960	0.64	+0.0
6,438,417	+		PFLU_RS28960	0.64	+0.9
6,438,417	+		PFLU_RS28960	0.64	-0.0
6,438,417	+		PFLU_RS28960	0.64	-1.0
6,438,418	-		PFLU_RS28960	0.64	+1.5
6,438,418	-		PFLU_RS28960	0.64	-2.5
6,438,418	-		PFLU_RS28960	0.64	+0.6
6,438,418	-		PFLU_RS28960	0.64	-0.8
6,438,418	-		PFLU_RS28960	0.64	+0.7
6,438,498	-		PFLU_RS28960	0.89	-1.6
6,438,551	+				-0.0
6,438,552	-				+2.2
6,438,552	-				-1.1
6,438,553	+				+2.8
6,438,553	+				+0.7
6,438,553	+				-1.6
6,438,553	+				-0.8
6,438,553	+				+0.1
6,438,553	+				-2.0
6,438,553	+				-0.6
6,438,553	+				-1.0
6,438,553	+				+2.7
6,438,553	+				-0.1
6,438,553	+				-0.3
6,438,553	+				+0.3
6,438,553	+				+0.3
6,438,553	+				-0.4
6,438,553	+				-2.6
6,438,553	+				+1.6
6,438,553	+				+2.6
6,438,553	+				-0.7
6,438,553	+				+1.4
6,438,553	+				+0.6
6,438,553	+				+0.4
6,438,553	+				+1.5
6,438,553	+				-1.0
6,438,553	+				+1.8
6,438,554	-				-0.0
6,438,554	-				-0.2
6,438,554	-				-1.4
6,438,554	-				+0.9
6,438,554	-				-0.0
6,438,554	-				-0.9
6,438,554	-				-0.1
6,438,554	-				-1.3
6,438,554	-				+1.4
6,438,554	-				-0.2
6,438,554	-				-1.4
6,438,554	-				-0.1
6,438,554	-				+0.3
6,438,554	-				-0.4
6,438,554	-				-1.1
6,438,613	-				+0.1
6,438,613	-				+1.7
6,438,666	+				-0.0
6,438,666	+				-0.5
6,438,666	+				+0.3
6,438,667	-				-0.1
6,438,673	+				-0.2
6,438,673	+				-2.1
6,438,673	+				-0.1
6,438,673	+				+1.2
6,438,673	+				+0.4
6,438,673	+				-2.2
6,438,674	-				-0.8
6,438,674	-				-1.3
6,438,674	-				+0.8
6,438,674	-				-0.5
6,438,711	+				-0.8
6,438,711	+				-0.2
6,438,711	+				-1.7
6,438,712	-				-0.4
6,438,712	-				-0.0
6,438,783	+				-0.3
6,438,783	+				-0.5
6,438,784	-				-1.4
6,438,784	-				+0.2
6,438,784	-				+1.6
6,438,784	-				-0.6
6,438,784	-				-1.6
6,438,784	-				+0.9
6,438,784	-				-0.2
6,438,784	-				+0.3
6,438,946	+		PFLU_RS28965	0.24	+0.3
6,438,946	+		PFLU_RS28965	0.24	+0.7
6,438,946	+		PFLU_RS28965	0.24	-1.7
6,438,946	+		PFLU_RS28965	0.24	-0.2
6,438,946	+		PFLU_RS28965	0.24	-0.3
6,438,946	+		PFLU_RS28965	0.24	-1.3
6,438,946	+		PFLU_RS28965	0.24	-0.6
6,438,946	+		PFLU_RS28965	0.24	-2.6
6,438,946	+		PFLU_RS28965	0.24	-0.8
6,438,946	+		PFLU_RS28965	0.24	-0.8
6,438,946	+		PFLU_RS28965	0.24	+1.8
6,438,946	+		PFLU_RS28965	0.24	-1.2
6,438,946	+		PFLU_RS28965	0.24	-0.8
6,438,946	+		PFLU_RS28965	0.24	+1.6
6,438,946	+		PFLU_RS28965	0.24	-0.5
6,438,946	+		PFLU_RS28965	0.24	-0.8
6,438,947	-		PFLU_RS28965	0.24	-0.8
6,438,947	-		PFLU_RS28965	0.24	+0.2
6,438,947	-		PFLU_RS28965	0.24	-1.9
6,438,947	-		PFLU_RS28965	0.24	-0.2
6,438,947	-		PFLU_RS28965	0.24	-1.4
6,438,947	-		PFLU_RS28965	0.24	+1.8
6,438,947	-		PFLU_RS28965	0.24	-1.1
6,438,947	-		PFLU_RS28965	0.24	-2.6
6,438,947	-		PFLU_RS28965	0.24	-1.2
6,438,947	-		PFLU_RS28965	0.24	-0.8
6,438,947	-		PFLU_RS28965	0.24	+1.2
6,438,947	-		PFLU_RS28965	0.24	-0.8
6,438,947	-		PFLU_RS28965	0.24	-0.2
6,438,956	+		PFLU_RS28965	0.25	+0.2
6,438,956	+		PFLU_RS28965	0.25	-0.8
6,438,956	+		PFLU_RS28965	0.25	-1.1
6,438,956	+		PFLU_RS28965	0.25	+0.4
6,438,957	-		PFLU_RS28965	0.25	-0.1
6,438,957	-		PFLU_RS28965	0.25	+0.2
6,438,960	+		PFLU_RS28965	0.26	+1.2
6,439,028	+		PFLU_RS28965	0.37	+0.6
6,439,028	+		PFLU_RS28965	0.37	-0.0
6,439,028	+		PFLU_RS28965	0.37	+0.2
6,439,028	+		PFLU_RS28965	0.37	-0.6
6,439,028	+		PFLU_RS28965	0.37	-0.1
6,439,028	+		PFLU_RS28965	0.37	-2.4
6,439,028	+		PFLU_RS28965	0.37	+0.4
6,439,028	+		PFLU_RS28965	0.37	-1.2
6,439,028	+		PFLU_RS28965	0.37	+0.0
6,439,028	+		PFLU_RS28965	0.37	+1.4
6,439,028	+		PFLU_RS28965	0.37	-1.4
6,439,028	+		PFLU_RS28965	0.37	+0.8
6,439,028	+		PFLU_RS28965	0.37	+1.0
6,439,029	-		PFLU_RS28965	0.37	+0.2
6,439,029	-		PFLU_RS28965	0.37	-1.8
6,439,029	-		PFLU_RS28965	0.37	-0.8
6,439,029	-		PFLU_RS28965	0.37	+0.6
6,439,029	-		PFLU_RS28965	0.37	-1.5
6,439,029	-		PFLU_RS28965	0.37	-2.2
6,439,138	+		PFLU_RS28965	0.54	-0.0
6,439,139	-		PFLU_RS28965	0.54	+0.8
6,439,139	-		PFLU_RS28965	0.54	-0.0
6,439,256	+		PFLU_RS28965	0.73	-1.0
6,439,256	+		PFLU_RS28965	0.73	-0.2
6,439,256	+		PFLU_RS28965	0.73	-0.9
6,439,256	+		PFLU_RS28965	0.73	+0.2
6,439,256	+		PFLU_RS28965	0.73	+2.1
6,439,257	-		PFLU_RS28965	0.73	-1.8
6,439,257	-		PFLU_RS28965	0.73	-0.6
6,439,257	-		PFLU_RS28965	0.73	-0.6
6,439,257	-		PFLU_RS28965	0.73	-1.8
6,439,379	-				-0.5
6,439,388	+				-1.1
6,439,388	+				-0.4
6,439,388	+				-2.6
6,439,388	+				+0.5
6,439,388	+				+0.6
6,439,388	+				-0.6
6,439,388	+				-0.6
6,439,388	+				+0.8
6,439,388	+				+2.6
6,439,388	+				+1.6
6,439,388	+				-1.7
6,439,388	+				+1.2
6,439,388	+				-1.0
6,439,388	+				+1.4
6,439,388	+				+0.2
6,439,388	+				+1.8
6,439,388	+				+0.1
6,439,388	+				-1.1
6,439,388	+				-1.2
6,439,388	+				-0.1
6,439,388	+				-0.4
6,439,388	+				+4.2
6,439,388	+				+0.2
6,439,388	+				-0.2
6,439,388	+				-0.2
6,439,388	+				+1.0
6,439,388	+				+0.6
6,439,388	+				-1.4
6,439,388	+				+1.6
6,439,388	+				-2.9
6,439,388	+				-1.1
6,439,388	+				-1.8
6,439,388	+				-1.8
6,439,388	+				-0.5
6,439,388	+				-1.5
6,439,388	+				-0.1
6,439,389	-				-1.1
6,439,389	-				-1.8
6,439,389	-				-1.1
6,439,389	-				-0.9
6,439,389	-				+0.7
6,439,389	-				-0.2
6,439,389	-				+0.8
6,439,389	-				+0.5
6,439,389	-				+2.2
6,439,389	-				-1.6
6,439,389	-				-0.9
6,439,389	-				-0.2
6,439,389	-				+1.6
6,439,389	-				-0.6
6,439,389	-				+0.2
6,439,389	-				-1.3
6,439,389	-				-1.3
6,439,389	-				-0.4
6,439,389	-				-0.5
6,439,389	-				+0.0
6,439,389	-				-1.4
6,439,389	-				-2.0
6,439,389	-				+0.0
6,439,389	-				-0.4
6,439,389	-				+0.3
6,439,389	-				-2.1
6,439,389	-				+0.5
6,439,390	+				-0.5
6,439,390	+				-0.8
6,439,390	+				-0.0
6,439,390	+				-0.0
6,439,391	-				-0.2
6,439,391	-				+1.1
6,439,391	-				+1.9
6,439,391	-				+1.9
6,439,510	+				-1.6
6,439,510	+				+0.2
6,439,511	-				-0.1
6,439,558	-				-0.2
6,439,560	+				+0.2
6,439,560	+				+0.2
6,439,560	+				-0.2
6,439,560	+				-1.4
6,439,560	+				+0.6
6,439,572	-				+0.8
6,439,572	-				+0.8
6,439,572	-				+0.4
6,439,572	-				+1.9
6,439,606	+				+0.4
6,439,606	+				-1.9
6,439,606	+				+0.2
6,439,607	-				+2.3
6,439,607	-				-1.1
6,439,632	+				+0.9
6,439,781	+				-1.5
6,439,864	+		PFLU_RS28970	0.20	+0.2
6,439,864	+		PFLU_RS28970	0.20	+0.2
6,439,864	+		PFLU_RS28970	0.20	+0.9
6,439,865	-		PFLU_RS28970	0.20	+0.6
6,439,865	-		PFLU_RS28970	0.20	+0.4
6,439,865	-		PFLU_RS28970	0.20	+0.2
6,439,865	-		PFLU_RS28970	0.20	+1.0
6,439,865	-		PFLU_RS28970	0.20	+1.4
6,439,865	-		PFLU_RS28970	0.20	-1.0
6,439,865	-		PFLU_RS28970	0.20	+0.2
6,439,868	+		PFLU_RS28970	0.21	-1.6
6,439,868	+		PFLU_RS28970	0.21	-1.4
6,439,868	+		PFLU_RS28970	0.21	-1.6
6,439,869	-		PFLU_RS28970	0.21	-0.8
6,439,869	-		PFLU_RS28970	0.21	-1.2
6,439,869	-		PFLU_RS28970	0.21	-1.7
6,439,869	-		PFLU_RS28970	0.21	-2.2
6,439,869	-		PFLU_RS28970	0.21	-0.6
6,439,869	-		PFLU_RS28970	0.21	+1.0
6,439,922	+		PFLU_RS28970	0.33	+1.3
6,439,922	+		PFLU_RS28970	0.33	+0.1
6,439,922	+		PFLU_RS28970	0.33	-0.4
6,439,922	+		PFLU_RS28970	0.33	+0.1
6,439,923	-		PFLU_RS28970	0.33	+1.8
6,439,923	-		PFLU_RS28970	0.33	-0.3
6,439,923	-		PFLU_RS28970	0.33	-1.3
6,439,923	-		PFLU_RS28970	0.33	+1.0
6,439,993	+		PFLU_RS28970	0.48	+1.0
6,440,018	+		PFLU_RS28970	0.54	+0.4
6,440,018	+		PFLU_RS28970	0.54	-0.5
6,440,018	+		PFLU_RS28970	0.54	-1.5
6,440,019	-		PFLU_RS28970	0.54	+0.9
6,440,019	-		PFLU_RS28970	0.54	+1.3
6,440,111	+		PFLU_RS28970	0.75	-1.4
6,440,209	-				-2.1
6,440,222	+				+1.1
6,440,222	+				-1.3
6,440,223	-				+0.8
6,440,223	-				-0.1
6,440,233	+				+0.0
6,440,266	+				+0.1
6,440,266	+				-1.4
6,440,266	+				+0.6
6,440,267	-				+0.6
6,440,267	-				-1.3
6,440,267	-				+1.2
6,440,267	-				+1.0
6,440,267	-				-1.8
6,440,275	-				-0.2
6,440,275	-				-0.9