Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS04895

Experiment: Glucose (C) and Ammonium chloride (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and Ammonium chloride (N); with TAPS
1,093,774	+		PFLU_RS04890	0.39	-0.3
1,093,774	+		PFLU_RS04890	0.39	-0.6
1,093,831	+		PFLU_RS04890	0.42	-0.2
1,093,849	+		PFLU_RS04890	0.43	+0.5
1,093,849	+		PFLU_RS04890	0.43	-0.5
1,093,849	+		PFLU_RS04890	0.43	-0.1
1,093,849	+		PFLU_RS04890	0.43	+0.9
1,093,849	+		PFLU_RS04890	0.43	-0.3
1,093,850	-		PFLU_RS04890	0.43	+1.6
1,093,850	-		PFLU_RS04890	0.43	-1.7
1,093,850	-		PFLU_RS04890	0.43	-0.7
1,093,850	-		PFLU_RS04890	0.43	-1.6
1,093,853	+		PFLU_RS04890	0.44	+0.7
1,093,853	+		PFLU_RS04890	0.44	+1.8
1,093,853	+		PFLU_RS04890	0.44	+1.4
1,093,854	-		PFLU_RS04890	0.44	+1.2
1,093,854	-		PFLU_RS04890	0.44	+1.6
1,093,854	-		PFLU_RS04890	0.44	-0.4
1,093,854	-		PFLU_RS04890	0.44	-1.4
1,093,854	-		PFLU_RS04890	0.44	+0.9
1,093,885	+		PFLU_RS04890	0.46	-0.6
1,093,885	+		PFLU_RS04890	0.46	+2.3
1,093,886	-		PFLU_RS04890	0.46	-0.7
1,093,891	+		PFLU_RS04890	0.46	+0.3
1,093,891	+		PFLU_RS04890	0.46	+0.2
1,093,891	+		PFLU_RS04890	0.46	-1.1
1,093,891	+		PFLU_RS04890	0.46	+0.7
1,093,892	-		PFLU_RS04890	0.46	+0.4
1,093,892	-		PFLU_RS04890	0.46	-0.9
1,093,892	-		PFLU_RS04890	0.46	+2.2
1,093,901	-		PFLU_RS04890	0.47	+1.7
1,093,901	-		PFLU_RS04890	0.47	-1.1
1,093,981	+		PFLU_RS04890	0.52	-1.3
1,093,982	-		PFLU_RS04890	0.52	+0.9
1,093,991	+		PFLU_RS04890	0.52	+0.3
1,093,991	+		PFLU_RS04890	0.52	+0.5
1,093,991	+		PFLU_RS04890	0.52	+4.3
1,093,992	-		PFLU_RS04890	0.52	-1.3
1,093,992	-		PFLU_RS04890	0.52	+0.1
1,094,002	+		PFLU_RS04890	0.53	+1.3
1,094,009	+		PFLU_RS04890	0.53	+0.8
1,094,009	+		PFLU_RS04890	0.53	-2.1
1,094,009	+		PFLU_RS04890	0.53	-0.3
1,094,009	+		PFLU_RS04890	0.53	+0.7
1,094,009	+		PFLU_RS04890	0.53	+2.4
1,094,009	+		PFLU_RS04890	0.53	+0.6
1,094,009	+		PFLU_RS04890	0.53	-1.1
1,094,009	+		PFLU_RS04890	0.53	-1.6
1,094,009	+		PFLU_RS04890	0.53	-0.9
1,094,009	+		PFLU_RS04890	0.53	-0.5
1,094,009	+		PFLU_RS04890	0.53	+1.4
1,094,009	+		PFLU_RS04890	0.53	-0.7
1,094,010	-		PFLU_RS04890	0.53	-0.7
1,094,053	+		PFLU_RS04890	0.56	+0.0
1,094,053	+		PFLU_RS04890	0.56	-1.7
1,094,053	+		PFLU_RS04890	0.56	-1.4
1,094,053	+		PFLU_RS04890	0.56	+1.7
1,094,053	+		PFLU_RS04890	0.56	-1.1
1,094,054	-		PFLU_RS04890	0.56	-0.6
1,094,054	-		PFLU_RS04890	0.56	+0.1
1,094,054	-		PFLU_RS04890	0.56	+1.9
1,094,110	+		PFLU_RS04890	0.60	-1.5
1,094,110	+		PFLU_RS04890	0.60	-2.0
1,094,111	-		PFLU_RS04890	0.60	+0.1
1,094,111	-		PFLU_RS04890	0.60	-0.4
1,094,111	-		PFLU_RS04890	0.60	+1.6
1,094,111	-		PFLU_RS04890	0.60	+1.3
1,094,314	+		PFLU_RS04890	0.73	-0.6
1,094,321	+		PFLU_RS04890	0.73	+0.3
1,094,322	-		PFLU_RS04890	0.73	-0.8
1,094,322	-		PFLU_RS04890	0.73	+0.9
1,094,356	+		PFLU_RS04890	0.75	-1.5
1,094,356	+		PFLU_RS04890	0.75	+0.1
1,094,357	-		PFLU_RS04890	0.75	+1.6
1,094,357	-		PFLU_RS04890	0.75	+0.6
1,094,357	-		PFLU_RS04890	0.75	-1.5
1,094,530	+		PFLU_RS04890	0.86	-0.6
1,094,599	+				+1.3
1,094,599	+				-0.9
1,094,599	+				-0.1
1,094,599	+				+0.5
1,094,599	+				-1.4
1,094,599	+				+2.3
1,094,599	+				-0.1
1,094,600	-				+0.5
1,094,600	-				+0.9
1,094,600	-				+0.2
1,094,600	-				+0.4
1,094,600	-				-2.5
1,094,600	-				+2.2
1,094,790	+				-0.1
1,094,790	+				+0.4
1,094,790	+				+0.7
1,094,790	+				-0.2
1,094,790	+				-2.6
1,094,791	-				-2.5
1,094,791	-				-1.6
1,094,791	-				+0.0
1,094,811	+				-1.5
1,094,811	+				+0.0
1,094,811	+				+0.9
1,094,913	+		PFLU_RS04895	0.11	-1.3
1,094,913	+		PFLU_RS04895	0.11	+0.9
1,094,913	+		PFLU_RS04895	0.11	+0.4
1,094,913	+		PFLU_RS04895	0.11	-0.1
1,094,913	+		PFLU_RS04895	0.11	-0.4
1,094,913	+		PFLU_RS04895	0.11	-1.2
1,094,913	+		PFLU_RS04895	0.11	-0.4
1,094,914	-		PFLU_RS04895	0.11	+1.0
1,094,914	-		PFLU_RS04895	0.11	-1.1
1,094,914	-		PFLU_RS04895	0.11	-0.9
1,094,914	-		PFLU_RS04895	0.11	+0.2
1,094,914	-		PFLU_RS04895	0.11	-1.8
1,094,914	-		PFLU_RS04895	0.11	+0.7
1,095,084	+		PFLU_RS04895	0.22	+1.4
1,095,084	+		PFLU_RS04895	0.22	+0.7
1,095,084	+		PFLU_RS04895	0.22	+0.2
1,095,085	-		PFLU_RS04895	0.23	+2.3
1,095,085	-		PFLU_RS04895	0.23	-2.4
1,095,102	+		PFLU_RS04895	0.24	+1.1
1,095,103	-		PFLU_RS04895	0.24	+1.1
1,095,103	-		PFLU_RS04895	0.24	-0.6
1,095,246	+		PFLU_RS04895	0.33	+1.4
1,095,247	-		PFLU_RS04895	0.33	+0.4
1,095,435	+		PFLU_RS04895	0.46	-0.9
1,095,465	+		PFLU_RS04895	0.48	-1.1
1,095,466	-		PFLU_RS04895	0.48	+2.0
1,095,466	-		PFLU_RS04895	0.48	-1.6
1,095,466	-		PFLU_RS04895	0.48	+1.1
1,095,466	-		PFLU_RS04895	0.48	+0.2
1,095,888	+		PFLU_RS04895	0.76	-1.0
1,096,006	-		PFLU_RS04895	0.84	-2.1
1,096,032	+		PFLU_RS04895	0.86	+0.8
1,096,237	+				-1.4
1,096,237	+				+0.4
1,096,238	-				-0.6
1,096,417	-		PFLU_RS04900	0.13	+0.0
1,096,436	+		PFLU_RS04900	0.15	+0.7
1,096,436	+		PFLU_RS04900	0.15	+0.7
1,096,436	+		PFLU_RS04900	0.15	-1.3
1,096,437	-		PFLU_RS04900	0.15	+0.4
1,096,437	-		PFLU_RS04900	0.15	-1.9
1,096,559	+		PFLU_RS04900	0.24	+0.3
1,096,560	-		PFLU_RS04900	0.24	-1.8
1,096,560	-		PFLU_RS04900	0.24	-0.5
1,096,574	+		PFLU_RS04900	0.25	-1.4
1,096,575	-		PFLU_RS04900	0.25	-2.1
1,096,586	+		PFLU_RS04900	0.26	-1.4
1,096,586	+		PFLU_RS04900	0.26	+0.3
1,096,601	+		PFLU_RS04900	0.27	-1.3
1,096,601	+		PFLU_RS04900	0.27	+1.4
1,096,602	-		PFLU_RS04900	0.27	-1.9
1,096,605	-		PFLU_RS04900	0.27	-1.6
1,096,688	+		PFLU_RS04900	0.33	-2.0
1,096,688	+		PFLU_RS04900	0.33	+2.1
1,096,689	-		PFLU_RS04900	0.33	-0.4
1,096,689	-		PFLU_RS04900	0.33	-0.4
1,096,691	+		PFLU_RS04900	0.33	+0.4
1,096,691	+		PFLU_RS04900	0.33	-0.6
1,096,751	+		PFLU_RS04900	0.37	-1.2
1,096,752	-		PFLU_RS04900	0.38	+0.2
1,096,752	-		PFLU_RS04900	0.38	-0.2
1,096,793	+		PFLU_RS04900	0.41	+1.9
1,096,912	+		PFLU_RS04900	0.49	+0.3
1,096,913	-		PFLU_RS04900	0.49	-0.1
1,097,033	+		PFLU_RS04900	0.58	+1.3
1,097,033	+		PFLU_RS04900	0.58	+0.4
1,097,034	-		PFLU_RS04900	0.58	+0.6
1,097,034	-		PFLU_RS04900	0.58	-0.0
1,097,064	+		PFLU_RS04900	0.60	+1.4
1,097,064	+		PFLU_RS04900	0.60	-1.8
1,097,065	-		PFLU_RS04900	0.60	+0.1
1,097,099	+		PFLU_RS04900	0.63	+0.6
1,097,099	+		PFLU_RS04900	0.63	-0.4
1,097,099	+		PFLU_RS04900	0.63	-0.3
1,097,099	+		PFLU_RS04900	0.63	+0.0
1,097,099	+		PFLU_RS04900	0.63	-0.4
1,097,099	+		PFLU_RS04900	0.63	+0.7
1,097,099	+		PFLU_RS04900	0.63	+1.6
1,097,099	+		PFLU_RS04900	0.63	+0.2
1,097,100	-		PFLU_RS04900	0.63	-0.7
1,097,100	-		PFLU_RS04900	0.63	-0.3
1,097,100	-		PFLU_RS04900	0.63	-1.0
1,097,100	-		PFLU_RS04900	0.63	-1.2
1,097,100	-		PFLU_RS04900	0.63	-1.3
1,097,100	-		PFLU_RS04900	0.63	-0.4
1,097,100	-		PFLU_RS04900	0.63	+0.7
1,097,118	-		PFLU_RS04900	0.64	+0.9
1,097,222	+		PFLU_RS04900	0.72	+0.6
1,097,222	+		PFLU_RS04900	0.72	-1.9
1,097,222	+		PFLU_RS04900	0.72	-1.6
1,097,223	-		PFLU_RS04900	0.72	-1.4
1,097,223	-		PFLU_RS04900	0.72	-0.9
1,097,223	-		PFLU_RS04900	0.72	+1.6
1,097,223	-		PFLU_RS04900	0.72	-1.8