Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS24025

Experiment: Glucose (C) and Ammonium chloride (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and Ammonium chloride (N); with TAPS
5,381,424	-				-1.7
5,381,510	+		PFLU_RS24015	0.28	-0.0
5,381,510	+		PFLU_RS24015	0.28	+1.9
5,381,510	+		PFLU_RS24015	0.28	-1.3
5,381,511	-		PFLU_RS24015	0.28	+0.7
5,381,555	+		PFLU_RS24015	0.49	-0.3
5,381,647	+				+0.3
5,381,647	+				+0.5
5,381,647	+				-0.5
5,381,648	-				+0.7
5,381,648	-				-1.9
5,381,648	-				-1.3
5,381,648	-				-1.1
5,381,728	+				-0.0
5,381,745	+				+0.4
5,381,835	+		PFLU_RS24020	0.15	-2.5
5,381,835	+		PFLU_RS24020	0.15	+2.3
5,381,835	+		PFLU_RS24020	0.15	+1.4
5,381,835	+		PFLU_RS24020	0.15	+0.3
5,381,836	-		PFLU_RS24020	0.16	+1.8
5,381,836	-		PFLU_RS24020	0.16	+0.1
5,381,836	-		PFLU_RS24020	0.16	-2.7
5,381,836	-		PFLU_RS24020	0.16	-2.2
5,381,836	-		PFLU_RS24020	0.16	-0.0
5,381,836	-		PFLU_RS24020	0.16	-2.6
5,381,836	-		PFLU_RS24020	0.16	+0.7
5,381,879	+		PFLU_RS24020	0.24	+1.0
5,381,880	-		PFLU_RS24020	0.25	+0.3
5,381,883	+		PFLU_RS24020	0.25	+1.0
5,381,883	+		PFLU_RS24020	0.25	-0.3
5,381,883	+		PFLU_RS24020	0.25	-1.9
5,381,884	-		PFLU_RS24020	0.25	-0.4
5,381,884	-		PFLU_RS24020	0.25	+1.6
5,381,884	-		PFLU_RS24020	0.25	+0.6
5,382,140	-		PFLU_RS24020	0.78	+1.0
5,382,159	-		PFLU_RS24020	0.82	+1.3
5,382,204	+				+1.4
5,382,204	+				-0.9
5,382,204	+				-1.1
5,382,204	+				+1.2
5,382,204	+				+0.2
5,382,204	+				+0.7
5,382,205	-				+1.0
5,382,220	+				+0.1
5,382,220	+				-1.2
5,382,220	+				-0.9
5,382,221	-				-0.1
5,382,221	-				+0.0
5,382,246	+				+0.9
5,382,246	+				+0.3
5,382,247	-				-0.6
5,382,247	-				+1.3
5,382,305	-				-2.7
5,382,407	-				+0.2
5,382,407	-				+0.4
5,382,565	+		PFLU_RS24025	0.17	-0.5
5,382,565	+		PFLU_RS24025	0.17	-0.6
5,382,565	+		PFLU_RS24025	0.17	-1.8
5,382,565	+		PFLU_RS24025	0.17	+0.5
5,382,566	-		PFLU_RS24025	0.17	-1.3
5,382,566	-		PFLU_RS24025	0.17	-0.8
5,382,639	+		PFLU_RS24025	0.24	-3.0
5,382,640	-		PFLU_RS24025	0.24	-0.1
5,382,668	-		PFLU_RS24025	0.27	-3.7
5,382,866	-		PFLU_RS24025	0.45	+0.5
5,382,891	+		PFLU_RS24025	0.48	-1.1
5,382,891	+		PFLU_RS24025	0.48	-1.8
5,382,891	+		PFLU_RS24025	0.48	-2.5
5,382,891	+		PFLU_RS24025	0.48	-0.9
5,382,891	+		PFLU_RS24025	0.48	+0.1
5,382,891	+		PFLU_RS24025	0.48	-1.2
5,382,891	+		PFLU_RS24025	0.48	-1.6
5,382,891	+		PFLU_RS24025	0.48	-2.2
5,382,891	+		PFLU_RS24025	0.48	-1.4
5,382,891	+		PFLU_RS24025	0.48	-2.6
5,382,892	-		PFLU_RS24025	0.48	-1.8
5,382,892	-		PFLU_RS24025	0.48	+1.0
5,382,892	-		PFLU_RS24025	0.48	+1.9
5,382,892	-		PFLU_RS24025	0.48	-1.6
5,382,892	-		PFLU_RS24025	0.48	-0.7
5,382,892	-		PFLU_RS24025	0.48	-1.0
5,382,892	-		PFLU_RS24025	0.48	-1.1
5,382,892	-		PFLU_RS24025	0.48	-0.1
5,382,892	-		PFLU_RS24025	0.48	+3.5
5,382,892	-		PFLU_RS24025	0.48	-2.5
5,382,892	-		PFLU_RS24025	0.48	-1.7
5,382,892	-		PFLU_RS24025	0.48	-0.5
5,382,892	-		PFLU_RS24025	0.48	-1.4
5,382,892	-		PFLU_RS24025	0.48	-1.6
5,382,892	-		PFLU_RS24025	0.48	-2.0
5,382,892	-		PFLU_RS24025	0.48	-2.1
5,382,892	-		PFLU_RS24025	0.48	-1.2
5,382,892	-		PFLU_RS24025	0.48	+1.1
5,383,026	+		PFLU_RS24025	0.60	-1.1
5,383,026	+		PFLU_RS24025	0.60	-1.7
5,383,026	+		PFLU_RS24025	0.60	-1.4
5,383,026	+		PFLU_RS24025	0.60	-0.4
5,383,026	+		PFLU_RS24025	0.60	-0.3
5,383,026	+		PFLU_RS24025	0.60	-1.4
5,383,026	+		PFLU_RS24025	0.60	+0.2
5,383,026	+		PFLU_RS24025	0.60	-1.7
5,383,026	+		PFLU_RS24025	0.60	-0.2
5,383,026	+		PFLU_RS24025	0.60	-1.8
5,383,026	+		PFLU_RS24025	0.60	-0.9
5,383,026	+		PFLU_RS24025	0.60	-1.6
5,383,026	+		PFLU_RS24025	0.60	-1.1
5,383,026	+		PFLU_RS24025	0.60	-1.3
5,383,026	+		PFLU_RS24025	0.60	+0.4
5,383,026	+		PFLU_RS24025	0.60	-0.2
5,383,026	+		PFLU_RS24025	0.60	-0.7
5,383,027	-		PFLU_RS24025	0.61	+0.7
5,383,027	-		PFLU_RS24025	0.61	-1.5
5,383,027	-		PFLU_RS24025	0.61	-0.7
5,383,027	-		PFLU_RS24025	0.61	+0.2
5,383,027	-		PFLU_RS24025	0.61	-2.2
5,383,027	-		PFLU_RS24025	0.61	-1.7
5,383,027	-		PFLU_RS24025	0.61	-2.2
5,383,027	-		PFLU_RS24025	0.61	+3.5
5,383,027	-		PFLU_RS24025	0.61	-0.1
5,383,027	-		PFLU_RS24025	0.61	-0.1
5,383,027	-		PFLU_RS24025	0.61	+0.1
5,383,027	-		PFLU_RS24025	0.61	-1.2
5,383,027	-		PFLU_RS24025	0.61	-0.9
5,383,296	+		PFLU_RS24025	0.86	-1.1
5,383,296	+		PFLU_RS24025	0.86	-1.3
5,383,297	-		PFLU_RS24025	0.86	-1.2
5,383,297	-		PFLU_RS24025	0.86	-1.9
5,383,297	-		PFLU_RS24025	0.86	-2.2
5,383,486	+				+0.1
5,383,486	+				-1.9
5,383,486	+				-2.5
5,383,486	+				-0.2
5,383,486	+				-0.3
5,383,486	+				-0.4
5,383,487	-				+1.6
5,383,487	-				-0.6
5,383,487	-				+0.3
5,383,487	-				+0.3
5,383,572	+				-2.4
5,383,572	+				+0.9
5,383,572	+				-1.7
5,383,573	-				+0.3
5,383,573	-				+2.0
5,383,573	-				+1.1
5,383,573	-				-1.0
5,383,579	+				+0.8
5,383,580	-				+2.2
5,383,600	+				+0.2
5,383,600	+				-0.1
5,383,601	-				+1.3
5,383,618	+				-0.2
5,383,619	-				+2.4
5,383,674	-				-2.0
5,383,712	+				+0.0
5,383,712	+				+1.5
5,383,713	-				-0.7
5,383,713	-				+0.5
5,383,713	-				+0.2
5,383,713	-				-0.0
5,383,713	-				-0.8
5,383,713	-				-0.7
5,383,744	-				+0.2
5,383,751	+				-1.4
5,383,751	+				+0.0
5,383,752	-				+1.9
5,383,763	+				+2.2
5,383,763	+				-2.2
5,383,763	+				+0.9
5,383,763	+				-0.7
5,383,763	+				+0.5
5,383,763	+				-0.4
5,383,763	+				-0.4
5,383,763	+				+0.7
5,383,763	+				+0.6
5,383,764	-				+2.4
5,383,764	-				+0.3
5,383,764	-				-0.3
5,383,764	-				+0.5
5,383,764	-				+0.7
5,383,764	-				-0.9
5,383,764	-				+1.9
5,383,764	-				+0.2
5,383,764	-				+1.1
5,383,764	-				-0.7
5,383,764	-				+1.4
5,383,774	+				-0.3
5,383,775	-				+0.3
5,383,820	+				-0.3
5,383,820	+				+0.1
5,383,821	-				-0.1
5,383,826	+				-1.9
5,383,826	+				-0.6
5,383,827	-				+0.2
5,383,827	-				-0.1
5,383,827	-				-0.9
5,383,988	+		PFLU_RS24030	0.22	-0.5
5,384,129	+		PFLU_RS24030	0.33	+0.5
5,384,129	+		PFLU_RS24030	0.33	-0.6
5,384,129	+		PFLU_RS24030	0.33	-1.6
5,384,129	+		PFLU_RS24030	0.33	-0.4
5,384,129	+		PFLU_RS24030	0.33	+0.3
5,384,129	+		PFLU_RS24030	0.33	-1.1
5,384,129	+		PFLU_RS24030	0.33	+0.5
5,384,129	+		PFLU_RS24030	0.33	-0.4
5,384,130	-		PFLU_RS24030	0.33	-0.0
5,384,130	-		PFLU_RS24030	0.33	-0.7
5,384,130	-		PFLU_RS24030	0.33	-0.7
5,384,130	-		PFLU_RS24030	0.33	-2.6
5,384,130	-		PFLU_RS24030	0.33	-0.4
5,384,130	-		PFLU_RS24030	0.33	+1.7
5,384,130	-		PFLU_RS24030	0.33	-1.2
5,384,130	-		PFLU_RS24030	0.33	-0.1
5,384,130	-		PFLU_RS24030	0.33	+0.7
5,384,130	-		PFLU_RS24030	0.33	+0.3
5,384,144	+		PFLU_RS24030	0.34	-1.4
5,384,145	-		PFLU_RS24030	0.34	+1.1
5,384,145	-		PFLU_RS24030	0.34	-0.1
5,384,225	+		PFLU_RS24030	0.41	-0.2
5,384,225	+		PFLU_RS24030	0.41	-1.6
5,384,225	+		PFLU_RS24030	0.41	-0.8
5,384,225	+		PFLU_RS24030	0.41	+0.6
5,384,225	+		PFLU_RS24030	0.41	+1.3
5,384,225	+		PFLU_RS24030	0.41	+0.6
5,384,225	+		PFLU_RS24030	0.41	+1.0
5,384,226	-		PFLU_RS24030	0.41	-0.7
5,384,226	-		PFLU_RS24030	0.41	+2.4
5,384,226	-		PFLU_RS24030	0.41	-0.4
5,384,226	-		PFLU_RS24030	0.41	+1.3
5,384,226	-		PFLU_RS24030	0.41	+0.1
5,384,226	-		PFLU_RS24030	0.41	-0.6
5,384,226	-		PFLU_RS24030	0.41	-0.4
5,384,226	-		PFLU_RS24030	0.41	-0.4
5,384,226	-		PFLU_RS24030	0.41	+0.6
5,384,294	+		PFLU_RS24030	0.46	+0.4
5,384,294	+		PFLU_RS24030	0.46	-2.9
5,384,294	+		PFLU_RS24030	0.46	+1.6
5,384,294	+		PFLU_RS24030	0.46	+0.9
5,384,294	+		PFLU_RS24030	0.46	+1.3
5,384,294	+		PFLU_RS24030	0.46	+0.8
5,384,294	+		PFLU_RS24030	0.46	-0.8
5,384,294	+		PFLU_RS24030	0.46	-0.5
5,384,294	+		PFLU_RS24030	0.46	+0.9
5,384,295	-		PFLU_RS24030	0.46	-0.2
5,384,295	-		PFLU_RS24030	0.46	+1.7
5,384,295	-		PFLU_RS24030	0.46	-1.6
5,384,295	-		PFLU_RS24030	0.46	-0.6
5,384,295	-		PFLU_RS24030	0.46	-0.9
5,384,295	-		PFLU_RS24030	0.46	+0.5
5,384,295	-		PFLU_RS24030	0.46	+0.7
5,384,295	-		PFLU_RS24030	0.46	-1.6
5,384,295	-		PFLU_RS24030	0.46	-1.4
5,384,295	-		PFLU_RS24030	0.46	+0.1
5,384,295	-		PFLU_RS24030	0.46	-1.8
5,384,295	-		PFLU_RS24030	0.46	+0.9
5,384,295	-		PFLU_RS24030	0.46	-1.0
5,384,295	-		PFLU_RS24030	0.46	-0.2
5,384,295	-		PFLU_RS24030	0.46	+0.1
5,384,295	-		PFLU_RS24030	0.46	+0.4
5,384,295	-		PFLU_RS24030	0.46	+0.0
5,384,312	+		PFLU_RS24030	0.47	+0.3
5,384,312	+		PFLU_RS24030	0.47	+0.2
5,384,312	+		PFLU_RS24030	0.47	+0.5
5,384,312	+		PFLU_RS24030	0.47	+0.8
5,384,312	+		PFLU_RS24030	0.47	+0.4
5,384,312	+		PFLU_RS24030	0.47	+0.9
5,384,312	+		PFLU_RS24030	0.47	-0.3
5,384,313	-		PFLU_RS24030	0.47	+0.3
5,384,313	-		PFLU_RS24030	0.47	+0.5
5,384,313	-		PFLU_RS24030	0.47	+0.4
5,384,313	-		PFLU_RS24030	0.47	-0.4
5,384,313	-		PFLU_RS24030	0.47	+1.9
5,384,313	-		PFLU_RS24030	0.47	+0.1
5,384,313	-		PFLU_RS24030	0.47	-0.1