Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS23815

Experiment: Glucose (C) and Ammonium chloride (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and Ammonium chloride (N); with TAPS
5,333,639	-				-0.5
5,333,639	-				-1.2
5,333,639	-				-0.5
5,333,639	-				-0.6
5,333,639	-				-0.7
5,333,639	-				-0.5
5,333,654	+				+0.1
5,333,654	+				-0.6
5,333,764	+				-1.1
5,333,764	+				-0.2
5,333,764	+				+0.2
5,333,765	-				-0.4
5,333,852	+		PFLU_RS23810	0.31	+0.2
5,333,852	+		PFLU_RS23810	0.31	-2.2
5,333,852	+		PFLU_RS23810	0.31	+0.1
5,333,852	+		PFLU_RS23810	0.31	+1.7
5,333,852	+		PFLU_RS23810	0.31	+1.5
5,333,853	-		PFLU_RS23810	0.32	+0.5
5,333,853	-		PFLU_RS23810	0.32	-0.1
5,333,853	-		PFLU_RS23810	0.32	-0.3
5,333,853	-		PFLU_RS23810	0.32	-0.6
5,333,853	-		PFLU_RS23810	0.32	+0.4
5,333,973	+				-1.1
5,333,973	+				-1.7
5,333,973	+				-1.1
5,333,974	-				+0.2
5,333,974	-				+0.6
5,333,974	-				+0.6
5,333,974	-				+0.6
5,333,974	-				-1.8
5,333,974	-				-0.7
5,333,979	+				-0.9
5,333,979	+				+0.5
5,333,979	+				+0.5
5,333,995	-				-0.3
5,334,021	+				+0.1
5,334,021	+				+0.1
5,334,021	+				+0.6
5,334,022	-				-0.2
5,334,022	-				-0.5
5,334,022	-				+1.4
5,334,022	-				-0.3
5,334,022	-				+0.2
5,334,106	+				+1.2
5,334,106	+				-2.0
5,334,106	+				+0.2
5,334,141	+				+0.5
5,334,141	+				-0.3
5,334,141	+				-0.3
5,334,141	+				+0.7
5,334,152	+				+0.1
5,334,152	+				-0.5
5,334,152	+				+1.1
5,334,152	+				-0.0
5,334,152	+				-0.5
5,334,152	+				-0.5
5,334,152	+				-1.1
5,334,153	-				+0.1
5,334,153	-				-1.1
5,334,229	+				+1.0
5,334,259	+				-0.9
5,334,259	+				-0.4
5,334,260	-				-1.7
5,334,260	-				-1.7
5,334,260	-				-0.5
5,334,260	-				+0.3
5,334,260	-				-3.6
5,334,260	-				-0.5
5,334,300	+				-1.5
5,334,300	+				-2.1
5,334,300	+				-0.8
5,334,300	+				-0.5
5,334,300	+				-2.9
5,334,300	+				-1.5
5,334,300	+				-0.1
5,334,300	+				-1.9
5,334,300	+				-1.7
5,334,300	+				+2.7
5,334,300	+				-1.1
5,334,300	+				-1.4
5,334,300	+				+0.5
5,334,300	+				-0.2
5,334,300	+				-2.2
5,334,300	+				+0.3
5,334,300	+				-0.3
5,334,301	-				-0.8
5,334,301	-				-0.2
5,334,301	-				-0.6
5,334,301	-				-0.3
5,334,301	-				-1.4
5,334,301	-				-0.9
5,334,301	-				+1.9
5,334,301	-				-1.7
5,334,301	-				-1.2
5,334,301	-				-0.9
5,334,301	-				+0.1
5,334,301	-				-0.1
5,334,301	-				-2.2
5,334,301	-				-2.1
5,334,301	-				+0.6
5,334,301	-				+1.3
5,334,301	-				-1.3
5,334,301	-				-0.3
5,334,301	-				-0.1
5,334,301	-				-2.7
5,334,378	+				-0.3
5,334,378	+				-1.1
5,334,443	+		PFLU_RS23815	0.12	-1.1
5,334,557	+		PFLU_RS23815	0.18	-2.6
5,334,557	+		PFLU_RS23815	0.18	-1.0
5,334,557	+		PFLU_RS23815	0.18	-1.4
5,334,557	+		PFLU_RS23815	0.18	-2.4
5,334,558	-		PFLU_RS23815	0.18	-2.7
5,334,558	-		PFLU_RS23815	0.18	-2.0
5,334,558	-		PFLU_RS23815	0.18	-0.9
5,334,585	+		PFLU_RS23815	0.19	-0.5
5,334,585	+		PFLU_RS23815	0.19	-1.7
5,334,585	+		PFLU_RS23815	0.19	+0.3
5,334,585	+		PFLU_RS23815	0.19	-1.5
5,334,585	+		PFLU_RS23815	0.19	-0.9
5,334,585	+		PFLU_RS23815	0.19	-2.4
5,334,585	+		PFLU_RS23815	0.19	-0.1
5,334,586	-		PFLU_RS23815	0.19	-1.3
5,334,586	-		PFLU_RS23815	0.19	-2.5
5,334,586	-		PFLU_RS23815	0.19	-1.5
5,334,586	-		PFLU_RS23815	0.19	-1.8
5,334,586	-		PFLU_RS23815	0.19	-1.9
5,334,594	+		PFLU_RS23815	0.20	-1.3
5,334,594	+		PFLU_RS23815	0.20	-3.0
5,334,594	+		PFLU_RS23815	0.20	-1.3
5,334,594	+		PFLU_RS23815	0.20	-2.2
5,334,595	-		PFLU_RS23815	0.20	+0.1
5,334,595	-		PFLU_RS23815	0.20	-0.6
5,334,595	-		PFLU_RS23815	0.20	-0.1
5,334,597	+		PFLU_RS23815	0.20	-0.8
5,334,597	+		PFLU_RS23815	0.20	-0.7
5,334,597	+		PFLU_RS23815	0.20	+0.1
5,334,597	+		PFLU_RS23815	0.20	-1.6
5,334,598	-		PFLU_RS23815	0.20	-0.6
5,334,598	-		PFLU_RS23815	0.20	-0.6
5,334,598	-		PFLU_RS23815	0.20	-0.1
5,334,611	+		PFLU_RS23815	0.21	-1.7
5,334,611	+		PFLU_RS23815	0.21	-1.1
5,334,611	+		PFLU_RS23815	0.21	-1.3
5,334,611	+		PFLU_RS23815	0.21	-0.3
5,334,611	+		PFLU_RS23815	0.21	-2.6
5,334,612	-		PFLU_RS23815	0.21	-2.3
5,334,612	-		PFLU_RS23815	0.21	-2.8
5,334,633	+		PFLU_RS23815	0.22	-1.2
5,334,633	+		PFLU_RS23815	0.22	-2.1
5,334,633	+		PFLU_RS23815	0.22	-1.4
5,334,633	+		PFLU_RS23815	0.22	-2.2
5,334,633	+		PFLU_RS23815	0.22	-2.1
5,334,633	+		PFLU_RS23815	0.22	-1.5
5,334,633	+		PFLU_RS23815	0.22	-0.3
5,334,633	+		PFLU_RS23815	0.22	-2.2
5,334,633	+		PFLU_RS23815	0.22	-2.6
5,334,633	+		PFLU_RS23815	0.22	-3.0
5,334,633	+		PFLU_RS23815	0.22	-0.1
5,334,633	+		PFLU_RS23815	0.22	-2.8
5,334,634	-		PFLU_RS23815	0.22	-2.4
5,334,634	-		PFLU_RS23815	0.22	-3.1
5,334,634	-		PFLU_RS23815	0.22	-1.5
5,334,634	-		PFLU_RS23815	0.22	-0.7
5,334,634	-		PFLU_RS23815	0.22	-2.1
5,334,634	-		PFLU_RS23815	0.22	-2.7
5,334,634	-		PFLU_RS23815	0.22	-1.7
5,334,634	-		PFLU_RS23815	0.22	-1.7
5,334,634	-		PFLU_RS23815	0.22	-1.4
5,334,634	-		PFLU_RS23815	0.22	-2.9
5,334,647	+		PFLU_RS23815	0.22	-0.6
5,334,647	+		PFLU_RS23815	0.22	-0.3
5,334,647	+		PFLU_RS23815	0.22	+0.3
5,334,648	-		PFLU_RS23815	0.22	-0.5
5,334,648	-		PFLU_RS23815	0.22	-1.1
5,334,671	+		PFLU_RS23815	0.23	+0.0
5,334,672	-		PFLU_RS23815	0.24	-0.9
5,334,672	-		PFLU_RS23815	0.24	-1.8
5,334,714	+		PFLU_RS23815	0.26	-1.8
5,334,714	+		PFLU_RS23815	0.26	-2.5
5,334,714	+		PFLU_RS23815	0.26	-0.7
5,334,714	+		PFLU_RS23815	0.26	-1.2
5,334,715	-		PFLU_RS23815	0.26	+0.1
5,334,723	+		PFLU_RS23815	0.26	-1.3
5,334,723	+		PFLU_RS23815	0.26	-1.9
5,334,723	+		PFLU_RS23815	0.26	-0.7
5,334,723	+		PFLU_RS23815	0.26	-0.3
5,334,724	-		PFLU_RS23815	0.26	-0.6
5,334,890	+		PFLU_RS23815	0.34	-0.5
5,334,890	+		PFLU_RS23815	0.34	-1.1
5,334,890	+		PFLU_RS23815	0.34	-0.1
5,334,890	+		PFLU_RS23815	0.34	-2.8
5,334,890	+		PFLU_RS23815	0.34	-0.0
5,334,890	+		PFLU_RS23815	0.34	+1.0
5,334,890	+		PFLU_RS23815	0.34	+0.3
5,334,890	+		PFLU_RS23815	0.34	-2.0
5,334,890	+		PFLU_RS23815	0.34	-0.6
5,334,890	+		PFLU_RS23815	0.34	-1.8
5,334,890	+		PFLU_RS23815	0.34	-1.6
5,334,891	-		PFLU_RS23815	0.34	+0.2
5,334,891	-		PFLU_RS23815	0.34	-1.4
5,334,891	-		PFLU_RS23815	0.34	-0.8
5,334,891	-		PFLU_RS23815	0.34	-0.0
5,334,891	-		PFLU_RS23815	0.34	-1.5
5,334,891	-		PFLU_RS23815	0.34	-0.0
5,334,891	-		PFLU_RS23815	0.34	+0.6
5,334,891	-		PFLU_RS23815	0.34	-2.3
5,334,893	+		PFLU_RS23815	0.34	+0.5
5,334,893	+		PFLU_RS23815	0.34	-1.7
5,334,894	-		PFLU_RS23815	0.34	-2.7
5,334,894	-		PFLU_RS23815	0.34	+1.5
5,334,894	-		PFLU_RS23815	0.34	-0.8
5,334,942	+		PFLU_RS23815	0.37	-1.8
5,334,943	-		PFLU_RS23815	0.37	-0.7
5,334,943	-		PFLU_RS23815	0.37	+0.9
5,334,943	-		PFLU_RS23815	0.37	-3.2
5,334,943	-		PFLU_RS23815	0.37	-2.4
5,334,943	-		PFLU_RS23815	0.37	-1.6
5,335,085	+		PFLU_RS23815	0.44	-3.5
5,335,085	+		PFLU_RS23815	0.44	-1.7
5,335,085	+		PFLU_RS23815	0.44	-0.7
5,335,085	+		PFLU_RS23815	0.44	+0.0
5,335,085	+		PFLU_RS23815	0.44	-0.5
5,335,085	+		PFLU_RS23815	0.44	-1.7
5,335,085	+		PFLU_RS23815	0.44	-1.8
5,335,086	-		PFLU_RS23815	0.44	-0.7
5,335,086	-		PFLU_RS23815	0.44	-2.0
5,335,086	-		PFLU_RS23815	0.44	-2.8
5,335,086	-		PFLU_RS23815	0.44	-1.6
5,335,089	+		PFLU_RS23815	0.44	-2.2
5,335,090	-		PFLU_RS23815	0.44	-2.2
5,335,195	+		PFLU_RS23815	0.49	-1.1
5,335,195	+		PFLU_RS23815	0.49	+0.5
5,335,218	+		PFLU_RS23815	0.50	-1.1
5,335,218	+		PFLU_RS23815	0.50	-1.5
5,335,218	+		PFLU_RS23815	0.50	-1.1
5,335,219	-		PFLU_RS23815	0.50	-1.6
5,335,219	-		PFLU_RS23815	0.50	-2.0
5,335,219	-		PFLU_RS23815	0.50	-1.5
5,335,289	+		PFLU_RS23815	0.54	-1.3
5,335,297	+		PFLU_RS23815	0.54	-2.8
5,335,419	+		PFLU_RS23815	0.60	-1.3
5,335,419	+		PFLU_RS23815	0.60	-1.2
5,335,419	+		PFLU_RS23815	0.60	-1.9
5,335,419	+		PFLU_RS23815	0.60	-0.4
5,335,419	+		PFLU_RS23815	0.60	-2.4
5,335,419	+		PFLU_RS23815	0.60	-2.0
5,335,419	+		PFLU_RS23815	0.60	-0.5
5,335,419	+		PFLU_RS23815	0.60	-0.5
5,335,419	+		PFLU_RS23815	0.60	-1.3
5,335,419	+		PFLU_RS23815	0.60	-2.6
5,335,419	+		PFLU_RS23815	0.60	-0.8
5,335,419	+		PFLU_RS23815	0.60	-1.3
5,335,419	+		PFLU_RS23815	0.60	+0.7
5,335,419	+		PFLU_RS23815	0.60	-0.6
5,335,419	+		PFLU_RS23815	0.60	-1.8
5,335,419	+		PFLU_RS23815	0.60	-2.1
5,335,419	+		PFLU_RS23815	0.60	+0.1
5,335,420	-		PFLU_RS23815	0.60	-2.4
5,335,420	-		PFLU_RS23815	0.60	-1.7
5,335,420	-		PFLU_RS23815	0.60	-1.2
5,335,420	-		PFLU_RS23815	0.60	-0.7
5,335,420	-		PFLU_RS23815	0.60	+1.0
5,335,420	-		PFLU_RS23815	0.60	+1.5
5,335,420	-		PFLU_RS23815	0.60	-0.3
5,335,420	-		PFLU_RS23815	0.60	+0.9
5,335,420	-		PFLU_RS23815	0.60	-2.0
5,335,420	-		PFLU_RS23815	0.60	-0.3
5,335,420	-		PFLU_RS23815	0.60	-2.0
5,335,420	-		PFLU_RS23815	0.60	-3.3
5,335,420	-		PFLU_RS23815	0.60	-2.9
5,335,420	-		PFLU_RS23815	0.60	-1.0
5,335,420	-		PFLU_RS23815	0.60	-0.2
5,335,420	-		PFLU_RS23815	0.60	-1.3
5,335,420	-		PFLU_RS23815	0.60	-0.5
5,335,420	-		PFLU_RS23815	0.60	-1.8
5,335,420	-		PFLU_RS23815	0.60	-2.7
5,335,420	-		PFLU_RS23815	0.60	-2.1
5,335,420	-		PFLU_RS23815	0.60	-1.7
5,335,420	-		PFLU_RS23815	0.60	-0.5
5,335,420	-		PFLU_RS23815	0.60	-2.5
5,335,420	-		PFLU_RS23815	0.60	-0.0
5,335,420	-		PFLU_RS23815	0.60	-1.1
5,335,420	-		PFLU_RS23815	0.60	-0.7
5,335,421	+		PFLU_RS23815	0.60	+0.3
5,335,422	-		PFLU_RS23815	0.60	-0.5
5,335,510	+		PFLU_RS23815	0.64	-0.5
5,335,510	+		PFLU_RS23815	0.64	-1.7
5,335,511	-		PFLU_RS23815	0.64	-1.4
5,335,512	+		PFLU_RS23815	0.64	-0.1
5,335,512	+		PFLU_RS23815	0.64	-0.7
5,335,512	+		PFLU_RS23815	0.64	+0.3
5,335,512	+		PFLU_RS23815	0.64	-2.3
5,335,512	+		PFLU_RS23815	0.64	-1.8
5,335,513	-		PFLU_RS23815	0.65	-1.9
5,335,530	+		PFLU_RS23815	0.65	-1.0
5,335,531	-		PFLU_RS23815	0.65	-0.9
5,335,555	+		PFLU_RS23815	0.67	-1.3
5,335,555	+		PFLU_RS23815	0.67	-1.4
5,335,555	+		PFLU_RS23815	0.67	-1.9
5,335,555	+		PFLU_RS23815	0.67	-0.7
5,335,556	-		PFLU_RS23815	0.67	-2.6
5,335,556	-		PFLU_RS23815	0.67	-1.2
5,335,556	-		PFLU_RS23815	0.67	-0.6
5,335,597	+		PFLU_RS23815	0.69	+1.4
5,335,597	+		PFLU_RS23815	0.69	+0.7
5,335,597	+		PFLU_RS23815	0.69	-1.1
5,335,598	-		PFLU_RS23815	0.69	-1.6
5,335,643	+		PFLU_RS23815	0.71	-2.3
5,335,643	+		PFLU_RS23815	0.71	-1.7
5,335,644	-		PFLU_RS23815	0.71	-2.2
5,335,769	-		PFLU_RS23815	0.77	-3.4
5,335,769	-		PFLU_RS23815	0.77	-1.7
5,335,800	+		PFLU_RS23815	0.79	+0.9
5,335,800	+		PFLU_RS23815	0.79	-0.6
5,335,801	-		PFLU_RS23815	0.79	+0.1
5,335,953	+		PFLU_RS23815	0.86	+1.3
5,335,953	+		PFLU_RS23815	0.86	-0.9
5,335,954	-		PFLU_RS23815	0.86	-0.1
5,335,954	-		PFLU_RS23815	0.86	-0.5
5,335,954	-		PFLU_RS23815	0.86	-2.3
5,336,121	+				-1.9
5,336,121	+				-0.9
5,336,121	+				-3.7
5,336,121	+				-0.7
5,336,121	+				-0.7
5,336,121	+				-1.2
5,336,121	+				-0.7
5,336,121	+				-1.6
5,336,121	+				-2.0
5,336,121	+				-1.3
5,336,121	+				+0.1
5,336,121	+				+0.9
5,336,121	+				+0.3
5,336,121	+				-1.5
5,336,121	+				+0.6
5,336,121	+				-2.0
5,336,121	+				-1.5
5,336,121	+				-2.0
5,336,122	-				-2.0
5,336,122	-				-1.5
5,336,122	-				-1.5
5,336,122	-				-0.7
5,336,122	-				-0.5
5,336,122	-				+0.6
5,336,122	-				-1.5
5,336,122	-				-0.4
5,336,122	-				-0.5
5,336,122	-				-2.5
5,336,122	-				-0.8
5,336,122	-				-0.7
5,336,122	-				-0.1
5,336,122	-				-0.8
5,336,122	-				-0.9
5,336,122	-				-2.5
5,336,122	-				-1.9
5,336,122	-				-0.5
5,336,122	-				-1.0
5,336,122	-				-2.0
5,336,122	-				-1.0
5,336,122	-				-1.6
5,336,122	-				-0.8
5,336,122	-				-2.3
5,336,122	-				-0.9
5,336,122	-				-3.5
5,336,122	-				-2.3
5,336,158	-				-3.3
5,336,163	+				-3.1
5,336,312	-				-1.5
5,336,318	+				+1.2
5,336,318	+				+0.3
5,336,319	-				+0.5
5,336,329	+				+0.1
5,336,329	+				-0.2
5,336,329	+				-0.6
5,336,329	+				+1.1
5,336,330	-				-0.9
5,336,330	-				-2.3
5,336,330	-				+0.3
5,336,330	-				-0.1
5,336,330	-				+0.7
5,336,330	-				+1.4
5,336,330	-				+0.5
5,336,330	-				+0.3
5,336,330	-				+0.7
5,336,330	-				-0.3
5,336,330	-				+0.9
5,336,330	-				-0.0
5,336,330	-				-0.1
5,336,331	+				-1.2
5,336,331	+				+0.9
5,336,332	-				-0.2
5,336,332	-				+0.9
5,336,332	-				+0.6
5,336,364	+				+0.9
5,336,365	-				+1.9
5,336,365	-				-0.5
5,336,365	-				-1.5
5,336,365	-				+1.4
5,336,433	+				+2.1
5,336,433	+				+0.4
5,336,434	-				-1.0
5,336,496	+				+1.1
5,336,496	+				-0.5
5,336,614	+		PFLU_RS23820	0.14	-0.8
5,336,615	-		PFLU_RS23820	0.14	+0.7
5,336,638	+		PFLU_RS23820	0.16	+1.5
5,336,638	+		PFLU_RS23820	0.16	-0.2
5,336,639	-		PFLU_RS23820	0.16	-0.7
5,336,639	-		PFLU_RS23820	0.16	-0.6
5,336,639	-		PFLU_RS23820	0.16	+0.4
5,336,759	-		PFLU_RS23820	0.25	-0.0
5,336,854	+		PFLU_RS23820	0.32	-0.7
5,336,854	+		PFLU_RS23820	0.32	+0.7
5,336,854	+		PFLU_RS23820	0.32	+1.2
5,336,854	+		PFLU_RS23820	0.32	-0.1
5,336,855	-		PFLU_RS23820	0.32	-0.4
5,336,855	-		PFLU_RS23820	0.32	+1.5
5,336,855	-		PFLU_RS23820	0.32	-0.0
5,336,869	+		PFLU_RS23820	0.33	+0.1
5,336,870	-		PFLU_RS23820	0.33	+1.2
5,336,870	-		PFLU_RS23820	0.33	-2.1
5,336,886	+		PFLU_RS23820	0.34	+0.9
5,336,920	-		PFLU_RS23820	0.37	-2.0
5,337,028	+		PFLU_RS23820	0.45	+1.0
5,337,109	+		PFLU_RS23820	0.51	+0.0
5,337,109	+		PFLU_RS23820	0.51	+1.2
5,337,110	-		PFLU_RS23820	0.51	-0.0
5,337,110	-		PFLU_RS23820	0.51	-0.2
5,337,110	-		PFLU_RS23820	0.51	-1.5
5,337,160	+		PFLU_RS23820	0.55	+0.6
5,337,160	+		PFLU_RS23820	0.55	+0.3
5,337,160	+		PFLU_RS23820	0.55	+0.6
5,337,160	+		PFLU_RS23820	0.55	-0.1
5,337,160	+		PFLU_RS23820	0.55	-0.1
5,337,160	+		PFLU_RS23820	0.55	-1.9
5,337,160	+		PFLU_RS23820	0.55	+1.7
5,337,160	+		PFLU_RS23820	0.55	-0.9
5,337,160	+		PFLU_RS23820	0.55	-0.9
5,337,161	-		PFLU_RS23820	0.55	+0.1
5,337,161	-		PFLU_RS23820	0.55	+1.2
5,337,161	-		PFLU_RS23820	0.55	+1.5
5,337,161	-		PFLU_RS23820	0.55	+0.2
5,337,161	-		PFLU_RS23820	0.55	+0.9
5,337,161	-		PFLU_RS23820	0.55	+1.3
5,337,225	+		PFLU_RS23820	0.60	+1.1
5,337,225	+		PFLU_RS23820	0.60	+1.1
5,337,225	+		PFLU_RS23820	0.60	+0.1
5,337,225	+		PFLU_RS23820	0.60	+0.9
5,337,226	-		PFLU_RS23820	0.60	-1.8
5,337,226	-		PFLU_RS23820	0.60	+0.2
5,337,226	-		PFLU_RS23820	0.60	+1.4
5,337,237	+		PFLU_RS23820	0.60	+0.5
5,337,237	+		PFLU_RS23820	0.60	-1.3
5,337,237	+		PFLU_RS23820	0.60	-0.5
5,337,237	+		PFLU_RS23820	0.60	+1.0
5,337,238	-		PFLU_RS23820	0.60	+0.5
5,337,238	-		PFLU_RS23820	0.60	-0.6
5,337,238	-		PFLU_RS23820	0.60	-1.5