Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS28025

Experiment: D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS
6,240,940	+		PFLU_RS28020	0.58	+0.3
6,240,940	+		PFLU_RS28020	0.58	-0.5
6,240,940	+		PFLU_RS28020	0.58	-0.9
6,240,941	-		PFLU_RS28020	0.58	-1.4
6,240,941	-		PFLU_RS28020	0.58	-0.3
6,240,941	-		PFLU_RS28020	0.58	-3.3
6,240,993	+		PFLU_RS28020	0.62	-1.6
6,240,993	+		PFLU_RS28020	0.62	+0.7
6,240,994	-		PFLU_RS28020	0.62	-0.3
6,240,994	-		PFLU_RS28020	0.62	-0.7
6,241,324	+		PFLU_RS28020	0.86	-2.4
6,241,325	-		PFLU_RS28020	0.86	-1.0
6,241,660	+				+0.2
6,241,660	+				-0.2
6,241,660	+				+0.7
6,241,660	+				-0.7
6,241,660	+				-0.5
6,241,660	+				+1.1
6,241,660	+				-0.4
6,241,660	+				+0.6
6,241,660	+				-1.1
6,241,695	+				+0.5
6,241,695	+				-1.3
6,241,696	-				+0.7
6,241,706	+				-0.5
6,241,707	-				-1.3
6,241,882	+		PFLU_RS28025	0.14	+0.8
6,241,882	+		PFLU_RS28025	0.14	+0.4
6,241,882	+		PFLU_RS28025	0.14	+0.4
6,241,882	+		PFLU_RS28025	0.14	+1.5
6,241,882	+		PFLU_RS28025	0.14	+0.3
6,241,882	+		PFLU_RS28025	0.14	+0.8
6,241,882	+		PFLU_RS28025	0.14	-0.2
6,241,882	+		PFLU_RS28025	0.14	-0.3
6,241,882	+		PFLU_RS28025	0.14	+3.9
6,241,882	+		PFLU_RS28025	0.14	+1.5
6,241,882	+		PFLU_RS28025	0.14	+0.5
6,241,882	+		PFLU_RS28025	0.14	-2.6
6,241,882	+		PFLU_RS28025	0.14	+0.4
6,241,882	+		PFLU_RS28025	0.14	-0.9
6,241,882	+		PFLU_RS28025	0.14	+1.9
6,241,882	+		PFLU_RS28025	0.14	+2.5
6,241,882	+		PFLU_RS28025	0.14	+3.0
6,241,883	-		PFLU_RS28025	0.14	-1.2
6,241,883	-		PFLU_RS28025	0.14	-0.3
6,241,883	-		PFLU_RS28025	0.14	-2.9
6,241,883	-		PFLU_RS28025	0.14	+0.7
6,241,883	-		PFLU_RS28025	0.14	-1.6
6,241,883	-		PFLU_RS28025	0.14	+1.5
6,241,883	-		PFLU_RS28025	0.14	-0.4
6,241,883	-		PFLU_RS28025	0.14	+1.5
6,241,883	-		PFLU_RS28025	0.14	+0.4
6,241,883	-		PFLU_RS28025	0.14	-0.3
6,241,883	-		PFLU_RS28025	0.14	+0.2
6,241,883	-		PFLU_RS28025	0.14	-1.8
6,241,883	-		PFLU_RS28025	0.14	+2.5
6,241,883	-		PFLU_RS28025	0.14	+0.3
6,241,883	-		PFLU_RS28025	0.14	+0.1
6,241,883	-		PFLU_RS28025	0.14	+1.4
6,241,883	-		PFLU_RS28025	0.14	+0.2
6,241,883	-		PFLU_RS28025	0.14	+0.1
6,241,883	-		PFLU_RS28025	0.14	+0.3
6,241,883	-		PFLU_RS28025	0.14	-0.6
6,241,883	-		PFLU_RS28025	0.14	-0.9
6,241,883	-		PFLU_RS28025	0.14	-0.5
6,241,883	-		PFLU_RS28025	0.14	+1.7
6,241,883	-		PFLU_RS28025	0.14	-0.3
6,241,886	+		PFLU_RS28025	0.14	-0.5
6,241,886	+		PFLU_RS28025	0.14	+0.3
6,241,886	+		PFLU_RS28025	0.14	+0.9
6,241,886	+		PFLU_RS28025	0.14	+0.0
6,241,886	+		PFLU_RS28025	0.14	+1.0
6,241,886	+		PFLU_RS28025	0.14	+0.3
6,241,886	+		PFLU_RS28025	0.14	+0.1
6,241,887	-		PFLU_RS28025	0.14	+0.3
6,241,887	-		PFLU_RS28025	0.14	+0.4
6,241,887	-		PFLU_RS28025	0.14	-2.4
6,241,887	-		PFLU_RS28025	0.14	+0.5
6,241,887	-		PFLU_RS28025	0.14	-1.4
6,241,887	-		PFLU_RS28025	0.14	-0.3
6,241,887	-		PFLU_RS28025	0.14	-0.5
6,241,887	-		PFLU_RS28025	0.14	+0.7
6,241,887	-		PFLU_RS28025	0.14	-0.8
6,241,887	-		PFLU_RS28025	0.14	+0.9
6,241,887	-		PFLU_RS28025	0.14	-0.2
6,241,887	-		PFLU_RS28025	0.14	-2.2
6,241,930	+		PFLU_RS28025	0.18	-2.7
6,241,949	+		PFLU_RS28025	0.19	+0.5
6,241,949	+		PFLU_RS28025	0.19	-0.4
6,241,997	+		PFLU_RS28025	0.23	+1.3
6,242,407	+		PFLU_RS28025	0.58	-0.1
6,242,453	+		PFLU_RS28025	0.62	+0.8
6,242,639	+		PFLU_RS28025	0.78	-0.2
6,242,639	+		PFLU_RS28025	0.78	-0.5
6,242,639	+		PFLU_RS28025	0.78	+0.2
6,242,639	+		PFLU_RS28025	0.78	-0.7
6,242,640	-		PFLU_RS28025	0.78	-1.0
6,242,640	-		PFLU_RS28025	0.78	+1.3
6,242,640	-		PFLU_RS28025	0.78	+1.9
6,242,801	+				+1.6
6,242,801	+				+1.5
6,242,801	+				-0.9
6,242,801	+				-1.3
6,242,801	+				+0.7
6,242,801	+				+1.1
6,242,801	+				+2.3
6,242,802	-				-0.3
6,242,802	-				-1.9
6,242,802	-				-0.0
6,242,802	-				-0.0
6,242,802	-				-1.7
6,242,802	-				-0.7
6,242,802	-				-1.9
6,242,802	-				-0.2
6,242,802	-				+0.1
6,242,806	+				+0.6
6,242,876	+				-1.6
6,242,891	+				+0.9
6,242,891	+				+1.4
6,242,891	+				-0.2
6,242,892	-				-2.2
6,242,892	-				-0.4
6,242,954	+				+1.2
6,242,954	+				+1.3
6,242,954	+				+1.2
6,242,954	+				-3.5
6,242,954	+				-2.4
6,242,954	+				+0.6
6,242,954	+				+0.7
6,242,954	+				+0.5
6,242,954	+				-1.6
6,242,960	+				+0.7
6,243,019	+				+0.5
6,243,037	+				+1.1
6,243,037	+				+0.7
6,243,038	-				+1.0
6,243,038	-				-0.7
6,243,038	-				+1.0
6,243,038	-				-0.3
6,243,038	-				+0.4
6,243,084	+				-1.0
6,243,084	+				-0.7
6,243,085	-				-0.4
6,243,085	-				-0.5
6,243,085	-				+1.5
6,243,085	-				-0.5
6,243,085	-				-0.1
6,243,186	+				+0.2
6,243,186	+				+0.2
6,243,186	+				-0.5
6,243,186	+				+0.1
6,243,187	-				+1.3
6,243,200	-				+1.0
6,243,200	-				-0.0
6,243,238	-				+1.9
6,243,471	+		PFLU_RS28030	0.16	+1.0
6,243,510	+		PFLU_RS28030	0.18	-0.1
6,243,510	+		PFLU_RS28030	0.18	+0.4
6,243,510	+		PFLU_RS28030	0.18	+0.9
6,243,510	+		PFLU_RS28030	0.18	-0.3
6,243,510	+		PFLU_RS28030	0.18	-0.5
6,243,510	+		PFLU_RS28030	0.18	+1.9
6,243,511	-		PFLU_RS28030	0.18	+0.3
6,243,511	-		PFLU_RS28030	0.18	+0.4
6,243,511	-		PFLU_RS28030	0.18	+1.4
6,243,511	-		PFLU_RS28030	0.18	-0.9
6,243,511	-		PFLU_RS28030	0.18	+0.7
6,243,511	-		PFLU_RS28030	0.18	-0.7
6,243,511	-		PFLU_RS28030	0.18	+1.1
6,243,511	-		PFLU_RS28030	0.18	+0.8
6,243,511	-		PFLU_RS28030	0.18	+0.3
6,243,511	-		PFLU_RS28030	0.18	-1.5
6,243,511	-		PFLU_RS28030	0.18	-0.3
6,243,511	-		PFLU_RS28030	0.18	-1.0
6,243,511	-		PFLU_RS28030	0.18	+2.5
6,243,511	-		PFLU_RS28030	0.18	-1.0
6,243,597	+		PFLU_RS28030	0.22	-0.0
6,243,598	-		PFLU_RS28030	0.22	+2.9
6,243,598	-		PFLU_RS28030	0.22	+1.2
6,243,687	+		PFLU_RS28030	0.26	-0.6
6,243,688	-		PFLU_RS28030	0.26	+1.1
6,243,688	-		PFLU_RS28030	0.26	-0.7
6,243,688	-		PFLU_RS28030	0.26	-2.1
6,243,823	+		PFLU_RS28030	0.32	+1.3
6,243,870	+		PFLU_RS28030	0.34	-0.4
6,243,870	+		PFLU_RS28030	0.34	+3.1
6,243,870	+		PFLU_RS28030	0.34	-0.1
6,243,870	+		PFLU_RS28030	0.34	+0.0
6,243,870	+		PFLU_RS28030	0.34	-1.7
6,243,871	-		PFLU_RS28030	0.34	-2.6
6,243,871	-		PFLU_RS28030	0.34	-0.7
6,243,871	-		PFLU_RS28030	0.34	+0.7
6,243,871	-		PFLU_RS28030	0.34	+0.6
6,243,871	-		PFLU_RS28030	0.34	+0.1