Strain Fitness in Shewanella oneidensis MR-1 around SO3097.2

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
3,222,402	-				-0.4
3,222,525	+		SO3097	0.11	-0.5
3,222,525	+		SO3097	0.11	+0.4
3,222,525	+		SO3097	0.11	-1.6
3,222,728	+		SO3097	0.40	+2.0
3,222,942	-		SO3097	0.70	-0.6
3,222,987	+		SO3097	0.76	-0.3
3,222,987	+		SO3097	0.76	-1.4
3,223,257	+				+0.7
3,223,373	+		SO3097.2	0.10	-0.8
3,223,373	+		SO3097.2	0.10	-2.1
3,223,381	-		SO3097.2	0.16	-1.0
3,223,438	-		SO3097.2	0.59	-1.8
3,223,529	-				-2.2
3,223,529	-				-0.7
3,223,550	-		SO3097.3	0.12	-0.2
3,223,555	+		SO3097.3	0.14	+0.1
3,223,672	+		SO3097.3	0.47	+1.4
3,223,749	+		SO3097.3	0.69	-1.6
3,223,788	+		SO3097.3	0.80	-0.3
3,224,075	-		SO3097.4	0.30	-1.5
3,224,075	-		SO3097.4	0.30	+0.8
3,224,094	-		SO3097.4	0.33	+0.2
3,224,116	+		SO3097.4	0.36	+1.2
3,224,300	+		SO3097.4	0.60	-1.1
3,224,324	+		SO3097.4	0.64	-0.3
3,224,388	+		SO3097.4	0.72	-0.8