Strain Fitness in Shewanella oneidensis MR-1 around SO4677

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
4,875,686	+				+1.2
4,875,686	+				-0.3
4,875,686	+				+0.5
4,875,686	+				-0.5
4,875,686	+				-1.1
4,875,686	+				-1.8
4,875,686	+				+0.1
4,875,686	+				+0.3
4,875,694	-				+1.0
4,875,694	-				+0.6
4,875,694	-				-0.0
4,875,694	-				+0.2
4,875,694	-				+0.1
4,875,713	-				-0.4
4,875,743	-				+0.3
4,876,518	-				-2.7
4,876,539	-				-2.8
4,876,539	-				-3.2
4,876,639	-				-2.5
4,876,639	-				-3.3
4,876,720	+		SO4678	0.16	-4.7
4,876,790	-		SO4678	0.23	-2.9
4,876,798	+		SO4678	0.24	-3.1
4,876,948	+		SO4678	0.38	-3.4
4,876,959	-		SO4678	0.39	-3.0
4,877,023	-		SO4678	0.45	-4.0
4,877,038	-		SO4678	0.47	-1.4
4,877,060	-		SO4678	0.49	-0.9
4,877,137	-		SO4678	0.56	-1.7
4,877,165	+		SO4678	0.59	-4.8
4,877,173	-		SO4678	0.60	-1.8
4,877,173	-		SO4678	0.60	-1.9
4,877,179	+		SO4678	0.60	-3.5
4,877,187	-		SO4678	0.61	-2.3
4,877,303	+		SO4678	0.72	-2.0
4,877,366	+		SO4678	0.78	+0.5
4,877,396	+		SO4678	0.81	-1.8
4,877,404	-		SO4678	0.82	-0.5
4,877,416	+		SO4678	0.83	-1.0
4,877,424	-		SO4678	0.84	-2.3
4,877,442	-		SO4678	0.86	-3.5
4,877,457	-		SO4678	0.87	-2.9