Strain Fitness in Shewanella oneidensis MR-1 around SO4197

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
4,363,922	-		SO4195	0.88	+1.5
4,364,061	-				+0.1
4,364,134	+				+1.0
4,364,142	-				+0.7
4,364,153	+				+0.5
4,364,153	+				-2.2
4,364,153	+				-0.6
4,364,153	+				-0.8
4,364,161	-				-1.8
4,364,187	-				+0.3
4,364,190	+				-2.4
4,364,245	-				-2.2
4,364,256	+				+1.1
4,364,264	-				-0.4
4,364,264	-				-0.4
4,364,264	-				-1.1
4,364,403	+		SO4196	0.38	-0.0
4,364,448	-		SO4196	0.56	-0.2
4,364,581	-				+1.7
4,364,581	-				-0.1
4,364,585	+				+0.5
4,364,787	-				-0.3
4,364,821	+				+0.1
4,364,829	-				-0.2
4,364,847	+				+0.5
4,364,847	+				-0.2
4,364,855	-				+0.6
4,364,894	+				+2.7
4,364,894	+				-0.7
4,364,894	+				-2.8
4,364,894	+				-1.9
4,364,894	+				-3.1
4,364,894	+				-2.5
4,364,902	-				-1.8
4,364,902	-				-2.2
4,364,902	-				+0.3
4,364,902	-				-2.0
4,364,902	-				-1.1
4,364,902	-				-2.4
4,364,902	-				-1.2
4,364,902	-				+0.3
4,364,949	-	menG-2	SO4197	0.14	-0.2
4,365,052	+	menG-2	SO4197	0.35	-0.3
4,365,052	+	menG-2	SO4197	0.35	-1.1
4,365,081	+	menG-2	SO4197	0.41	-2.5
4,365,346	+				-0.5
4,365,356	+				+0.2
4,365,356	+				-0.2
4,365,364	-				+1.1
4,365,364	-				-0.5
4,365,540	+				-1.2
4,365,627	+				+0.8
4,365,720	-				-0.9
4,365,731	+				-1.8
4,366,053	+		SO4198	0.39	-1.8
4,366,131	-		SO4198	0.49	-0.2
4,366,138	-		SO4198	0.50	+0.0
4,366,138	-		SO4198	0.50	-0.6
4,366,155	+		SO4198	0.52	-1.4
4,366,227	+		SO4198	0.61	-1.2
4,366,232	+		SO4198	0.61	+0.0
4,366,240	-		SO4198	0.62	-0.6
4,366,246	+		SO4198	0.63	-2.2
4,366,269	+		SO4198	0.66	-2.0
4,366,362	+		SO4198	0.77	-0.2