Strain Fitness in Shewanella oneidensis MR-1 around SO4182

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
4,354,125	-				-0.1
4,354,174	-		SO_4181	0.15	+0.2
4,354,210	-		SO_4181	0.19	+1.2
4,354,221	-		SO_4181	0.20	+0.6
4,354,296	-		SO_4181	0.28	-1.2
4,354,313	-		SO_4181	0.30	-0.1
4,354,363	+		SO_4181	0.35	-0.4
4,354,373	+		SO_4181	0.36	-2.7
4,354,440	-		SO_4181	0.44	+0.3
4,354,532	-		SO_4181	0.54	-0.3
4,354,532	-		SO_4181	0.54	+2.3
4,354,552	+		SO_4181	0.56	-1.6
4,354,557	+		SO_4181	0.56	-0.5
4,354,590	+		SO_4181	0.60	-0.7
4,354,590	+		SO_4181	0.60	-0.4
4,354,598	-		SO_4181	0.61	-1.2
4,354,676	-		SO_4181	0.69	+0.7
4,354,723	+		SO_4181	0.75	-1.3
4,354,723	+		SO_4181	0.75	-1.8
4,354,840	+		SO_4181	0.87	+0.4
4,354,912	+				-1.6
4,354,982	-				+1.1
4,355,022	+				-1.3
4,355,108	-		SO4182	0.17	-2.3
4,355,113	+		SO4182	0.18	+1.5
4,355,169	+		SO4182	0.28	+0.3
4,355,171	-		SO4182	0.28	-0.1
4,355,209	+		SO4182	0.35	-0.8
4,355,214	+		SO4182	0.36	+0.7
4,355,214	+		SO4182	0.36	-0.2
4,355,222	-		SO4182	0.37	+0.0
4,355,275	-		SO4182	0.46	+0.5
4,355,291	-		SO4182	0.49	-0.5
4,355,334	-		SO4182	0.56	-0.3
4,355,372	-		SO4182	0.63	-0.6
4,355,432	+		SO4182	0.73	-1.6
4,355,526	-		SO4182	0.90	-0.3
4,355,526	-		SO4182	0.90	+2.0
4,355,526	-		SO4182	0.90	-1.6
4,355,531	+				-0.3
4,355,591	+				+0.8
4,355,610	-				+1.1