Strain Fitness in Shewanella oneidensis MR-1 around SO3614

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
3,774,676	-	purT	SO3613	0.38	-0.4
3,774,757	-	purT	SO3613	0.45	-2.0
3,774,797	+	purT	SO3613	0.48	+0.6
3,774,797	-	purT	SO3613	0.48	+1.4
3,774,797	-	purT	SO3613	0.48	-0.2
3,774,797	-	purT	SO3613	0.48	-0.2
3,774,835	+	purT	SO3613	0.52	-0.0
3,774,860	+	purT	SO3613	0.54	+1.0
3,774,897	+	purT	SO3613	0.57	-1.1
3,775,015	+	purT	SO3613	0.67	+1.5
3,775,030	-	purT	SO3613	0.69	-1.1
3,775,032	+	purT	SO3613	0.69	-0.5
3,775,033	-	purT	SO3613	0.69	+1.1
3,775,039	+	purT	SO3613	0.70	+0.7
3,775,323	-				+0.1
3,775,346	+				-0.6
3,775,346	+				-0.2
3,775,346	+				-0.3
3,775,354	-				-2.5
3,775,354	-				+2.6
3,775,354	-				+1.0
3,775,354	-				-0.9
3,775,354	-				-1.1
3,775,354	-				-0.0
3,775,354	-				-1.4
3,775,502	+				-0.3
3,775,502	+				+0.7
3,775,502	+				+0.1
3,775,551	-				+0.1
3,775,566	-				+0.6
3,775,566	-				-0.5
3,775,580	+				+0.7
3,775,602	+				-0.2
3,775,602	+				-1.5
3,775,603	-				-1.3
3,775,603	-				-1.0
3,775,610	-				-0.1
3,775,610	-				-1.2
3,775,655	-				-0.7
3,775,743	-				-0.2
3,775,780	-		SO3614	0.11	-1.7
3,775,832	-		SO3614	0.14	-1.1
3,775,848	+		SO3614	0.15	+0.1
3,775,880	+		SO3614	0.17	+0.2
3,775,977	+		SO3614	0.23	-0.5
3,775,985	-		SO3614	0.24	+1.8
3,776,003	+		SO3614	0.25	-1.9
3,776,031	+		SO3614	0.27	+0.0
3,776,072	-		SO3614	0.30	-0.2
3,776,154	-		SO3614	0.35	-0.9
3,776,444	-		SO3614	0.54	-0.1
3,776,473	+		SO3614	0.56	+1.8
3,776,473	+		SO3614	0.56	+0.6
3,776,475	+		SO3614	0.56	+0.1
3,776,475	+		SO3614	0.56	-3.0
3,776,475	+		SO3614	0.56	+0.6
3,776,483	-		SO3614	0.56	-0.7
3,776,579	+		SO3614	0.63	-0.1
3,776,587	+		SO3614	0.63	-0.0
3,776,595	-		SO3614	0.64	-1.0
3,776,687	+		SO3614	0.70	+0.7
3,776,695	-		SO3614	0.70	+1.8
3,776,771	-		SO3614	0.75	+0.2
3,776,896	+		SO3614	0.83	-0.6
3,777,080	+				+0.1
3,777,095	-				+1.2
3,777,105	-				-1.2
3,777,105	-				-0.5
3,777,105	-				-0.3
3,777,121	-				+1.1
3,777,230	-				-0.9
3,777,245	+				-1.1
3,777,245	+				-2.6
3,777,245	+				-1.8
3,777,281	+				+0.7
3,777,324	+				+1.1
3,777,405	+		SO3615	0.11	+1.6
3,777,492	-		SO3615	0.15	+1.6
3,777,508	-		SO3615	0.16	-1.0
3,777,552	+		SO3615	0.18	+0.1
3,777,560	-		SO3615	0.18	+0.1
3,777,560	-		SO3615	0.18	-0.7
3,777,563	+		SO3615	0.18	-2.5
3,777,563	+		SO3615	0.18	-0.9
3,777,605	+		SO3615	0.20	+0.5
3,777,662	-		SO3615	0.23	+0.2
3,777,691	+		SO3615	0.24	+0.7
3,777,697	-		SO3615	0.24	-0.3
3,777,697	-		SO3615	0.24	-0.7
3,777,699	-		SO3615	0.24	+0.8
3,777,699	-		SO3615	0.24	-1.4
3,777,730	-		SO3615	0.26	+0.5
3,777,757	+		SO3615	0.27	-0.4
3,777,765	-		SO3615	0.27	-1.0
3,777,765	-		SO3615	0.27	-0.4
3,777,791	-		SO3615	0.28	+1.8
3,777,793	+		SO3615	0.28	+0.5
3,777,848	+		SO3615	0.31	+0.3
3,777,942	+		SO3615	0.35	-0.4
3,777,949	-		SO3615	0.35	+0.9
3,777,999	+		SO3615	0.37	-0.5
3,778,037	-		SO3615	0.39	-1.4
3,778,080	+		SO3615	0.41	+0.5
3,778,144	+		SO3615	0.44	-0.4