Strain Fitness in Shewanella oneidensis MR-1 around SO3484

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
3,630,371	+		SO3483	0.40	+0.6
3,630,379	-		SO3483	0.41	+1.2
3,630,402	+		SO3483	0.43	-1.6
3,630,571	-		SO3483	0.58	-0.7
3,630,662	-		SO3483	0.66	+0.1
3,630,765	-		SO3483	0.76	-1.6
3,630,825	+		SO3483	0.81	+1.5
3,630,880	+		SO3483	0.86	+2.0
3,630,891	+		SO3483	0.87	+0.0
3,630,891	+		SO3483	0.87	-0.3
3,630,891	+		SO3483	0.87	+0.4
3,630,925	-				-0.3
3,630,925	-				+1.0
3,631,007	+				+1.7
3,631,009	+				+0.9
3,631,009	+				-0.9
3,631,165	-				+1.1
3,631,251	+				+1.2
3,631,272	+				+0.8
3,631,344	+				-0.3
3,631,349	+		SO3484	0.10	+1.8
3,631,406	+		SO3484	0.12	+0.5
3,631,414	-		SO3484	0.12	+0.2
3,631,481	+		SO3484	0.14	+0.8
3,631,541	-		SO3484	0.16	-0.2
3,631,588	+		SO3484	0.18	+0.7
3,631,601	-		SO3484	0.18	+0.6
3,631,705	-		SO3484	0.21	+1.4
3,631,721	+		SO3484	0.22	-0.5
3,631,721	+		SO3484	0.22	+0.4
3,631,739	-		SO3484	0.22	+0.1
3,631,739	-		SO3484	0.22	-0.5
3,631,877	+		SO3484	0.27	-1.3
3,631,877	+		SO3484	0.27	-1.6
3,631,877	+		SO3484	0.27	-0.1
3,631,877	+		SO3484	0.27	+0.3
3,631,877	+		SO3484	0.27	-2.6
3,631,877	+		SO3484	0.27	+0.4
3,631,877	+		SO3484	0.27	-0.3
3,631,877	+		SO3484	0.27	+2.6
3,631,885	-		SO3484	0.27	-0.2
3,631,885	-		SO3484	0.27	+1.7
3,631,885	-		SO3484	0.27	+1.6
3,631,908	+		SO3484	0.28	-0.6
3,632,040	-		SO3484	0.32	+1.0
3,632,353	+		SO3484	0.42	+0.5
3,632,356	-		SO3484	0.42	+1.3
3,632,361	-		SO3484	0.42	-0.8
3,632,443	+		SO3484	0.45	-0.4
3,632,451	-		SO3484	0.45	+0.5
3,632,471	+		SO3484	0.46	+2.0
3,632,477	+		SO3484	0.46	-0.4
3,632,477	+		SO3484	0.46	+2.2
3,632,485	-		SO3484	0.46	+0.4
3,632,485	-		SO3484	0.46	-0.8
3,632,485	-		SO3484	0.46	+1.0
3,632,485	-		SO3484	0.46	+0.5
3,632,485	-		SO3484	0.46	-1.2
3,632,485	-		SO3484	0.46	-0.4
3,632,485	-		SO3484	0.46	+0.3
3,632,485	-		SO3484	0.46	-0.8
3,632,485	-		SO3484	0.46	+0.2
3,632,568	+		SO3484	0.49	+0.1
3,632,568	+		SO3484	0.49	+0.4
3,632,576	-		SO3484	0.49	+1.6
3,632,600	+		SO3484	0.50	-0.1
3,632,670	-		SO3484	0.52	+1.7
3,632,715	-		SO3484	0.54	-0.6
3,632,715	-		SO3484	0.54	+0.6
3,632,715	-		SO3484	0.54	-0.2
3,632,762	+		SO3484	0.55	+1.4
3,632,791	-		SO3484	0.56	+0.9
3,632,835	-		SO3484	0.57	+0.4
3,632,835	-		SO3484	0.57	-1.8
3,632,902	+		SO3484	0.60	-0.2
3,633,046	-		SO3484	0.64	+1.0
3,633,073	-		SO3484	0.65	+1.5
3,633,118	+		SO3484	0.66	+0.9
3,633,123	+		SO3484	0.67	-0.2
3,633,148	-		SO3484	0.67	-0.6
3,633,215	+		SO3484	0.69	-0.7
3,633,223	-		SO3484	0.70	+0.0
3,633,223	-		SO3484	0.70	-0.3
3,633,454	-		SO3484	0.77	+2.3
3,633,467	-		SO3484	0.77	+0.4
3,633,469	+		SO3484	0.78	-1.7
3,633,487	+		SO3484	0.78	+2.0
3,633,487	+		SO3484	0.78	+0.3
3,633,495	-		SO3484	0.78	+0.2
3,633,495	-		SO3484	0.78	-1.4
3,633,665	+		SO3484	0.84	-0.3
3,633,720	+		SO3484	0.86	+0.5
3,633,744	+		SO3484	0.86	+1.0
3,633,754	-		SO3484	0.87	+0.1
3,633,844	+		SO3484	0.89	+1.0
3,633,857	-		SO3484	0.90	+0.0
3,633,990	+				+1.1
3,634,016	+				+0.1
3,634,016	+				+0.1
3,634,057	-				+0.2
3,634,129	+				-0.7
3,634,310	+				+0.5
3,634,310	+				+0.8
3,634,310	+				-1.1
3,634,315	+				+1.2
3,634,318	-				+1.1
3,634,369	+				-0.4
3,634,369	+				-2.1
3,634,447	+		SO3485	0.15	+0.3
3,634,455	-		SO3485	0.16	+0.8
3,634,470	-		SO3485	0.17	-0.7
3,634,483	+		SO3485	0.18	-0.6
3,634,597	+		SO3485	0.28	-0.0
3,634,619	-		SO3485	0.30	-2.1
3,634,619	-		SO3485	0.30	-0.4
3,634,619	-		SO3485	0.30	+0.4
3,634,721	-		SO3485	0.39	-2.4
3,634,728	-		SO3485	0.39	-0.8
3,634,856	+		SO3485	0.50	-1.0
3,634,896	-		SO3485	0.54	+0.0
3,634,952	-		SO3485	0.59	-1.3
3,635,009	-		SO3485	0.64	-1.0
3,635,095	+		SO3485	0.71	-1.4
3,635,103	-		SO3485	0.72	-3.1