Strain Fitness in Shewanella oneidensis MR-1 around SO3288

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
3,432,189	-	purL	SO3287	0.84	-0.4
3,432,307	-	purL	SO3287	0.87	-0.4
3,432,335	+	purL	SO3287	0.88	-3.1
3,432,335	+	purL	SO3287	0.88	-3.1
3,432,343	-	purL	SO3287	0.88	+0.5
3,432,345	+	purL	SO3287	0.88	-1.8
3,432,367	+	purL	SO3287	0.88	+0.5
3,432,487	-				-0.6
3,432,708	+				-1.8
3,432,721	-				-2.6
3,432,799	-				-1.4
3,432,861	-				-2.1
3,432,861	-				-1.7
3,432,861	-				-1.5
3,432,861	-				-0.4
3,432,861	-				-1.5
3,432,905	-				-0.2
3,432,920	+				-1.6
3,433,005	+				+0.6
3,433,015	+				+0.2
3,433,160	-				+2.3
3,433,241	+				+0.7
3,433,249	-				+1.9
3,433,292	-				+2.4
3,433,344	+		SO3288	0.13	+0.5
3,433,390	+		SO3288	0.17	+1.3
3,433,544	-		SO3288	0.28	+1.8
3,433,591	-		SO3288	0.31	+1.4
3,433,606	+		SO3288	0.32	+2.0
3,433,654	+		SO3288	0.36	+1.4
3,433,677	-		SO3288	0.37	+0.6
3,433,679	-		SO3288	0.38	-0.3
3,433,788	-		SO3288	0.46	+2.3
3,434,075	-		SO3288	0.66	-0.2
3,434,240	-		SO3288	0.78	+2.8
3,434,268	+		SO3288	0.80	+1.4
3,434,508	-				-0.8
3,434,510	+				+1.0
3,434,510	+				+2.1
3,434,510	+				+0.1
3,434,510	+				+0.5
3,434,809	-				-0.9
3,434,809	-				+0.8
3,434,809	-				-0.6
3,434,950	+				+1.0
3,435,011	+				+1.0