Strain Fitness in Shewanella oneidensis MR-1 around SO3208

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
3,348,181	-		SO3207	0.66	-2.7
3,348,325	-		SO3207	0.72	-2.0
3,348,366	-		SO3207	0.74	-0.6
3,348,466	+		SO3207	0.78	-0.9
3,348,575	-		SO3207	0.83	-0.3
3,348,578	-		SO3207	0.83	+0.1
3,348,707	+		SO3207	0.89	+0.4
3,348,712	+		SO3207	0.89	+0.7
3,348,712	+		SO3207	0.89	-0.3
3,348,720	-		SO3207	0.90	-1.2
3,348,720	-		SO3207	0.90	-1.1
3,348,720	-		SO3207	0.90	-0.3
3,348,762	+				+0.7
3,348,782	-				+0.4
3,348,799	+				+0.3
3,348,799	+				+0.6
3,348,840	+				-0.8
3,348,922	+				-2.0
3,349,009	+				-0.0
3,349,017	-				+1.6
3,349,017	-				-0.8
3,349,017	-				+0.7
3,349,017	-				-0.6
3,349,113	+	cheZ	SO3208	0.19	+0.4
3,349,302	+	cheZ	SO3208	0.45	-1.1
3,349,656	-				-1.2
3,349,666	-				-0.7
3,349,689	+				-2.5
3,349,712	+				-0.0
3,349,713	-				+2.1
3,349,720	-				-1.3
3,349,767	-	cheY-3	SO3209	0.11	-0.0
3,349,789	+	cheY-3	SO3209	0.17	+1.6
3,349,899	+	cheY-3	SO3209	0.46	-0.8
3,350,007	+	cheY-3	SO3209	0.74	-0.3
3,350,116	-				-1.3
3,350,191	-				-0.9
3,350,534	-	fliA	SO3210	0.53	-1.0
3,350,671	-	fliA	SO3210	0.72	-0.9
3,350,686	-	fliA	SO3210	0.74	-1.6