Strain Fitness in Shewanella oneidensis MR-1 around SO3104

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
3,231,393	+		SO3103	0.73	-0.4
3,231,433	+		SO3103	0.74	-0.5
3,231,552	-		SO3103	0.78	-1.4
3,231,552	-		SO3103	0.78	-0.5
3,231,642	+		SO3103	0.80	+1.2
3,231,650	-		SO3103	0.81	-1.4
3,231,687	+		SO3103	0.82	-0.3
3,231,809	-		SO3103	0.85	-0.2
3,231,910	-		SO3103	0.89	+0.2
3,232,410	-		SO3104	0.40	-0.6
3,232,473	-		SO3104	0.69	-1.5
3,232,729	-	pspE-1	SO3105	0.42	-1.4
3,232,767	+	pspE-1	SO3105	0.51	-0.7
3,232,922	-				-0.4
3,232,964	-				-1.0
3,233,056	-				+0.7
3,233,057	+				-0.9