Strain Fitness in Shewanella oneidensis MR-1 around SO3065

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
3,181,235	-	purF	SO3064	0.68	-0.4
3,181,268	+	purF	SO3064	0.70	-0.6
3,181,330	+	purF	SO3064	0.74	-2.5
3,181,407	-	purF	SO3064	0.79	-0.7
3,181,554	-	purF	SO3064	0.89	-0.1
3,181,587	+				+0.5
3,181,595	-				-0.7
3,181,645	-				-0.8
3,181,652	-				-0.6
3,182,017	+		SO3065	0.22	-1.8
3,182,025	-		SO3065	0.24	-0.3
3,182,059	+		SO3065	0.31	+1.9
3,182,420	+				-1.0
3,182,428	-				+1.3
3,182,448	-				+0.3
3,182,590	-				+0.0
3,182,638	+		SO3066	0.15	-0.1
3,182,658	+		SO3066	0.18	+0.5
3,182,658	+		SO3066	0.18	+2.3
3,182,658	+		SO3066	0.18	+0.9
3,182,666	-		SO3066	0.19	-1.0
3,182,837	-		SO3066	0.39	-0.1
3,182,975	-		SO3066	0.55	-0.3
3,183,153	-		SO3066	0.76	-0.7