Strain Fitness in Shewanella oneidensis MR-1 around SO2844

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
2,962,805	-		SO2843	0.70	-0.4
2,962,944	+		SO2843	0.75	-0.6
2,962,952	-		SO2843	0.75	+0.6
2,962,995	-		SO2843	0.76	+0.0
2,963,210	+		SO2843	0.83	+0.2
2,963,272	+		SO2843	0.85	-0.2
2,963,380	+		SO2843	0.89	-2.9
2,963,388	-		SO2843	0.89	-1.2
2,963,398	-		SO2843	0.90	-1.3
2,963,414	+				-0.4
2,963,453	+				+0.4
2,963,461	-				+0.2
2,963,584	-				-0.3
2,963,670	+				+0.6
2,963,687	-				+0.3
2,963,700	-				+0.0
2,964,111	+		SO2844	0.33	-1.3
2,964,333	-		SO2844	0.52	-1.2
2,964,412	+		SO2844	0.58	+0.3
2,964,422	+		SO2844	0.59	+2.0
2,964,522	-		SO2844	0.68	+0.3
2,964,554	-		SO2844	0.70	-0.4
2,964,603	-		SO2844	0.74	-0.9
2,964,680	-		SO2844	0.81	+0.5
2,964,682	+		SO2844	0.81	+0.3
2,964,788	+		SO2844	0.90	-1.7
2,964,796	-				-0.1
2,964,796	-				-1.2
2,965,073	+				+1.4
2,965,300	+		SO2846	0.12	+1.4
2,965,301	+		SO2846	0.12	-0.8
2,965,584	+		SO2846	0.49	-0.5
2,965,584	+		SO2846	0.49	-0.9
2,965,585	-		SO2846	0.49	-0.7
2,965,732	+		SO2846	0.68	-0.6
2,965,778	+		SO2846	0.74	+0.3