Strain Fitness in Shewanella oneidensis MR-1 around SO2752

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
2,872,750	-		SO2752	0.18	-0.7
2,872,755	-		SO2752	0.19	-1.4
2,872,755	-		SO2752	0.19	-0.8
2,872,763	-		SO2752	0.21	-3.1
2,872,765	-		SO2752	0.22	-0.9
2,872,768	-		SO2752	0.23	-1.6
2,872,788	-		SO2752	0.28	-1.5
2,872,836	-		SO2752	0.40	-1.5
2,872,956	+		SO2752	0.69	-3.8
2,872,978	+		SO2752	0.75	+0.8
2,873,115	+				-2.4
2,873,350	+				+1.2
2,873,360	+				+0.2
2,873,368	-				-1.0
2,873,434	+				-0.7
2,873,435	-				+0.5
2,873,437	+				+0.3
2,873,445	-				-1.2
2,873,497	-		SO2753	0.11	+0.5
2,873,555	-		SO2753	0.14	-0.2
2,873,561	+		SO2753	0.14	-0.2
2,873,628	+		SO2753	0.17	-1.5
2,873,646	-		SO2753	0.18	+0.3
2,873,658	+		SO2753	0.19	+0.7
2,873,658	+		SO2753	0.19	-1.4
2,873,658	+		SO2753	0.19	-1.7
2,873,666	-		SO2753	0.19	+3.6
2,873,666	-		SO2753	0.19	+1.7
2,873,684	-		SO2753	0.20	-0.3
2,873,998	+		SO2753	0.34	+1.1
2,874,043	-		SO2753	0.36	-0.0
2,874,043	-		SO2753	0.36	+0.5