Strain Fitness in Shewanella oneidensis MR-1 around SO2706

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
2,825,891	-				+1.1
2,826,135	+	astB	SO2706	0.14	-0.2
2,826,238	-	astB	SO2706	0.22	-0.2
2,826,243	-	astB	SO2706	0.22	-1.8
2,826,378	-	astB	SO2706	0.32	+0.9
2,826,396	-	astB	SO2706	0.34	+1.4
2,826,420	+	astB	SO2706	0.35	+4.7
2,826,508	-	astB	SO2706	0.42	+0.7
2,826,619	-	astB	SO2706	0.50	+1.7
2,826,741	-	astB	SO2706	0.59	+1.0
2,826,970	+	astB	SO2706	0.77	-0.6
2,827,013	-	astB	SO2706	0.80	+0.3
2,827,183	+				+0.0
2,827,260	+				-0.2
2,827,268	-				+0.2
2,827,527	+		SO2707	0.29	+0.3
2,827,535	-		SO2707	0.31	+0.8
2,827,535	-		SO2707	0.31	-1.4
2,827,535	-		SO2707	0.31	+0.1
2,827,535	-		SO2707	0.31	-1.8
2,827,556	+		SO2707	0.35	+0.5
2,827,676	-		SO2707	0.58	+1.5
2,827,705	+		SO2707	0.64	+1.1
2,827,719	-		SO2707	0.67	+0.2
2,827,749	-		SO2707	0.72	-0.7
2,827,845	+				-0.4
2,827,859	-				+0.4
2,828,035	+		SO2708	0.20	+0.1
2,828,035	+		SO2708	0.20	+0.4
2,828,043	-		SO2708	0.21	-0.2
2,828,043	-		SO2708	0.21	-0.1
2,828,241	-		SO2708	0.57	-1.7