Strain Fitness in Shewanella oneidensis MR-1 around SO2614

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
2,750,398	-				+0.5
2,750,406	-				-0.5
2,750,552	-		SO2614	0.20	+0.3
2,750,552	-		SO2614	0.20	+0.5
2,750,572	-		SO2614	0.22	-1.9
2,750,598	-		SO2614	0.24	-0.8
2,750,704	-		SO2614	0.35	-0.1
2,751,419	-				-0.1
2,751,419	-				+1.5
2,751,555	-	pabC	SO2615	0.24	-0.6
2,751,734	-	pabC	SO2615	0.46	+1.5
2,751,758	-	pabC	SO2615	0.49	+1.9
2,751,948	-	pabC	SO2615	0.72	-1.3