Strain Fitness in Shewanella oneidensis MR-1 around SO2414

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
2,518,852	+				+1.2
2,518,944	+				-0.1
2,519,786	+				+0.7
2,519,855	+		SO2414	0.17	-1.1
2,519,858	-		SO2414	0.18	+0.4
2,519,888	-		SO2414	0.22	-1.3
2,519,941	+		SO2414	0.30	-2.9
2,519,957	-		SO2414	0.32	-1.9
2,520,039	+		SO2414	0.44	+0.1
2,520,039	+		SO2414	0.44	-0.7
2,520,047	-		SO2414	0.45	-1.1
2,520,092	-		SO2414	0.52	-1.1
2,520,117	-		SO2414	0.55	+1.4
2,520,117	-		SO2414	0.55	-1.1
2,520,215	-		SO2414	0.69	-0.9
2,520,222	+		SO2414	0.70	-1.2
2,520,359	+				-0.2
2,520,366	-				-1.6
2,520,384	+				-1.4
2,520,384	+				-0.3
2,520,384	+				+0.2
2,520,443	+				+0.0