Strain Fitness in Shewanella oneidensis MR-1 around SO2338

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
2,444,254	-				+3.2
2,444,403	-				+0.9
2,444,883	+				+0.7
2,444,991	+				-2.1
2,445,030	+				+0.9
2,445,074	+				-0.5
2,445,116	-				+0.9
2,445,343	+	astE	SO2338	0.16	-1.8
2,445,348	+	astE	SO2338	0.17	+0.2
2,445,527	-	astE	SO2338	0.34	+0.6
2,445,534	+	astE	SO2338	0.35	-2.3
2,445,560	-	astE	SO2338	0.37	-0.9
2,445,730	-	astE	SO2338	0.54	-0.4
2,445,732	+	astE	SO2338	0.54	-2.3
2,445,839	+	astE	SO2338	0.64	-1.5
2,445,863	-	astE	SO2338	0.66	-0.6
2,445,934	+	astE	SO2338	0.73	+0.2
2,446,184	+				-0.3
2,446,818	-		SO2339	0.38	+2.2
2,446,862	+		SO2339	0.42	+2.2
2,446,868	-		SO2339	0.42	+3.2
2,446,968	-		SO2339	0.51	+3.2
2,447,090	-		SO2339	0.61	+3.2
2,447,151	+		SO2339	0.66	+3.2
2,447,160	-		SO2339	0.67	+2.2
2,447,196	+		SO2339	0.70	+2.2