Strain Fitness in Shewanella oneidensis MR-1 around SO2291

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
2,403,961	-		SO2290	0.36	+1.2
2,404,007	+		SO2290	0.41	+2.0
2,404,120	+		SO2290	0.52	+0.6
2,404,125	+		SO2290	0.53	+0.9
2,404,211	+		SO2290	0.61	+0.5
2,404,268	+		SO2290	0.67	+0.6
2,404,306	-		SO2290	0.71	+0.2
2,404,324	+		SO2290	0.73	+0.3
2,404,332	-		SO2290	0.73	+0.0
2,404,527	+				+0.3
2,404,608	+				-0.8
2,404,624	+				+0.6
2,404,643	-				-0.1
2,404,713	+				+1.2
2,404,713	+				-0.5
2,404,713	+				-1.3
2,404,721	-				+0.0
2,405,006	+		SO2291	0.54	-1.4
2,405,007	+		SO2291	0.54	+1.1
2,405,007	+		SO2291	0.54	+0.0
2,405,038	+		SO2291	0.62	-0.8