Strain Fitness in Shewanella oneidensis MR-1 around SO2234

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
2,351,190	+		SO_2233	0.20	-0.5
2,351,296	+		SO_2233	0.36	-0.9
2,351,527	+		SO_2233	0.71	-1.1
2,351,696	+				-1.0
2,351,916	+				+0.4
2,352,071	-				-0.9
2,352,218	-		SO2234	0.19	-1.4
2,352,316	+		SO2234	0.45	-1.7
2,352,339	+		SO2234	0.52	-1.3
2,352,452	-		SO2234	0.82	+1.0
2,352,521	+				+1.4
2,352,662	-				+1.7
2,352,717	-	crr	SO2236	0.10	+0.3
2,352,872	+	crr	SO2236	0.41	-0.1
2,352,879	+	crr	SO2236	0.42	+0.4
2,352,879	+	crr	SO2236	0.42	+0.0
2,352,879	+	crr	SO2236	0.42	-0.6
2,352,912	+	crr	SO2236	0.49	-0.3
2,352,912	+	crr	SO2236	0.49	-0.9
2,352,993	+	crr	SO2236	0.65	+0.7
2,353,143	-				+1.6
2,353,216	+				-1.8
2,353,258	+				-0.9
2,353,376	+				+0.2
2,353,384	-				-0.7