Strain Fitness in Shewanella oneidensis MR-1 around SO1652

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
1,739,654	-		SO1651	0.73	-2.6
1,739,656	-		SO1651	0.73	+0.1
1,739,656	-		SO1651	0.73	+0.1
1,739,698	-		SO1651	0.75	+1.0
1,739,724	+		SO1651	0.75	+0.5
1,739,952	+		SO1651	0.82	+1.7
1,740,001	+		SO1651	0.84	-0.9
1,740,034	+		SO1651	0.85	-2.9
1,740,159	+		SO1651	0.89	-1.2
1,740,229	+				+0.8
1,740,229	+				-2.2
1,740,350	+				-1.1
1,740,356	+				+0.1
1,740,374	+				+0.3
1,740,482	-				-0.9
1,740,482	-				-1.6
1,740,505	-				-0.7
1,740,517	-				+3.0
1,740,558	+				+0.4
1,740,686	+				+0.5
1,740,694	-				+0.1
1,740,773	-		SO1652	0.18	+2.0
1,740,914	+		SO1652	0.37	+1.2
1,740,967	+		SO1652	0.44	-0.7
1,740,972	+		SO1652	0.44	+1.0
1,740,989	+		SO1652	0.47	-1.0
1,740,989	+		SO1652	0.47	-0.4
1,740,989	+		SO1652	0.47	+0.5
1,741,120	+		SO1652	0.64	-0.5
1,741,190	-		SO1652	0.73	+1.4
1,741,295	+		SO1652	0.87	-2.8
1,741,316	-		SO1652	0.90	+0.6
1,742,391	+				+0.7
1,742,392	+				+2.0