Strain Fitness in Shewanella oneidensis MR-1 around SO1353

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
1,408,297	-	acpS	SO1352	0.25	-1.5
1,408,490	-	acpS	SO1352	0.76	-2.6
1,408,599	+				-0.5
1,408,736	+				+0.3
1,408,922	+		SO1353	0.32	-1.9
1,409,008	+		SO1353	0.48	-1.1
1,409,010	+		SO1353	0.48	-2.1
1,409,021	-		SO1353	0.51	-1.7
1,409,021	-		SO1353	0.51	-0.5
1,409,121	-		SO1353	0.70	+0.0
1,409,217	-		SO1353	0.88	-0.1
1,409,362	+				+3.3
1,409,479	-		SO1354	0.10	+0.3
1,409,511	-		SO1354	0.13	-1.2
1,409,583	+		SO1354	0.18	-2.4
1,409,729	-		SO1354	0.30	+1.5
1,409,773	-		SO1354	0.33	-0.4
1,409,847	+		SO1354	0.39	-1.1
1,409,899	+		SO1354	0.43	+0.3
1,410,112	-		SO1354	0.60	+0.3
1,410,112	-		SO1354	0.60	+0.3
1,410,112	-		SO1354	0.60	+1.7