Strain Fitness in Shewanella oneidensis MR-1 around SO1268

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
1,314,356	+				+0.8
1,314,365	+				+0.0
1,314,368	-				+2.0
1,314,478	-		SO1267	0.15	+1.0
1,314,596	+		SO1267	0.30	+0.0
1,314,871	+				+0.0
1,314,871	+		SO1267	0.67	-0.3
1,314,871	+		SO1267	0.67	-0.3
1,314,894	+		SO1267	0.70	+0.4
1,314,902	-		SO1267	0.71	+1.3
1,314,902	-		SO1267	0.71	+2.9
1,314,902	-		SO1267	0.71	+2.1
1,314,902	-		SO1267	0.71	+3.0
1,314,902	-		SO1267	0.71	+1.1
1,314,902	-		SO1267	0.71	+2.1
1,314,917	-		SO1267	0.73	+0.4
1,315,199	+				+1.5
1,315,199	+				+1.8
1,315,734	+		SO1268	0.45	+2.5
1,315,734	+		SO1268	0.45	+0.7
1,315,814	-		SO1268	0.51	+0.9
1,316,210	+		SO1268	0.80	+1.1
1,316,218	-		SO1268	0.80	+2.0
1,316,218	-		SO1268	0.80	+1.3
1,316,244	+		SO1268	0.82	+1.9
1,316,252	-		SO1268	0.83	+1.1
1,316,252	-		SO1268	0.83	+0.4
1,316,319	+		SO1268	0.88	+2.0
1,316,319	-		SO1268	0.88	+0.0
1,316,503	-				-0.3