Strain Fitness in Shewanella oneidensis MR-1 around SO1107

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
1,149,336	-	nqrC-2	SO1105	0.73	-0.6
1,149,408	-	nqrC-2	SO1105	0.82	+1.8
1,149,774	-	nqrD-2	SO1106	0.35	+2.8
1,150,157	-				+0.5
1,150,323	+	nqrE-2	SO1107	0.22	-1.1
1,150,427	-	nqrE-2	SO1107	0.39	+0.8
1,150,539	+	nqrE-2	SO1107	0.58	-0.5
1,150,556	-	nqrE-2	SO1107	0.60	+0.8
1,150,638	+	nqrE-2	SO1107	0.74	+0.0