Strain Fitness in Shewanella oneidensis MR-1 around SO1021

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
1,059,087	+				-1.0
1,059,195	+				-1.4
1,059,325	+	nuoB	SO1020	0.19	-2.0
1,059,349	+	nuoB	SO1020	0.23	+0.2
1,059,357	-	nuoB	SO1020	0.24	+0.6
1,059,474	-	nuoB	SO1020	0.41	-1.2
1,059,479	-	nuoB	SO1020	0.42	-2.0
1,059,649	-	nuoB	SO1020	0.67	-0.3
1,059,656	-	nuoB	SO1020	0.68	-1.5
1,059,726	-	nuoB	SO1020	0.78	-0.2
1,059,742	+	nuoB	SO1020	0.81	-2.6
1,059,742	+	nuoB	SO1020	0.81	-1.7
1,059,822	-				-1.6
1,059,975	-	nuoA	SO1021	0.18	-1.0
1,060,171	-	nuoA	SO1021	0.67	-2.3
1,060,180	-	nuoA	SO1021	0.69	-0.7
1,060,274	+				-1.4
1,060,274	+				-2.0
1,060,274	+				+0.1
1,060,282	-				-0.5
1,060,282	-				-0.5
1,060,415	+				+0.7
1,060,468	-				-0.0
1,060,502	-				-1.1
1,060,502	-				-0.7
1,060,530	+				-1.4
1,060,613	+				+0.1
1,060,689	+				-0.4
1,060,697	-				+0.7
1,060,703	+				-0.3
1,060,742	-				-1.8
1,060,745	+				+0.5
1,060,753	-				-0.0
1,060,753	-				-0.6
1,060,870	-				+0.8
1,060,874	+				-0.4
1,061,019	+				+0.5
1,061,037	-				-0.0
1,061,055	+				+1.2
1,061,058	-				+0.7
1,061,125	-				+0.9
1,061,130	-				+0.8
1,061,148	+				+0.5
1,061,209	-				-1.7
1,061,223	-				-0.7
1,061,223	-				+0.0
1,061,237	-				-0.3