Strain Fitness in Shewanella oneidensis MR-1 around SO0934

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
965,294	+				-0.4
965,320	+				-0.0
965,483	+				-2.9
965,491	-				-1.0
965,594	+		SO0934	0.19	-1.3
965,705	+		SO0934	0.34	-0.7
965,705	+		SO0934	0.34	-3.5
965,705	+		SO0934	0.34	-0.4
965,760	-		SO0934	0.41	-1.3
965,796	-		SO0934	0.46	+1.7
965,826	+		SO0934	0.50	-2.3
965,826	+		SO0934	0.50	+0.1
965,841	-		SO0934	0.52	-3.1
965,841	-		SO0934	0.52	+0.4
965,849	-		SO0934	0.53	-0.3
966,175	-				-0.4
966,541	+				+0.7
966,565	+				+0.2
966,617	+	nhaD	SO0935	0.10	+0.6
966,803	-	nhaD	SO0935	0.23	-1.3
966,861	-	nhaD	SO0935	0.27	+0.6
966,876	-	nhaD	SO0935	0.28	+0.7
966,946	-	nhaD	SO0935	0.33	+0.3
966,964	-	nhaD	SO0935	0.34	-0.7
967,120	+	nhaD	SO0935	0.45	-2.2
967,130	+	nhaD	SO0935	0.46	+0.6
967,130	+	nhaD	SO0935	0.46	+0.1