Strain Fitness in Shewanella oneidensis MR-1 around SO0879

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
907,994	+				+0.2
908,000	-				-0.1
908,002	-				+1.1
908,040	+				-1.6
908,041	+				-0.7
908,096	-	prkB	SO0878	0.14	-1.5
908,181	-	prkB	SO0878	0.23	+0.8
908,193	-	prkB	SO0878	0.24	+0.2
908,216	-	prkB	SO0878	0.27	-0.5
908,218	+	prkB	SO0878	0.27	-1.0
908,299	+	prkB	SO0878	0.36	-0.3
908,350	+	prkB	SO0878	0.42	+1.9
908,372	-	prkB	SO0878	0.45	+1.7
908,431	+	prkB	SO0878	0.51	-1.9
908,455	-	prkB	SO0878	0.54	+1.7
908,465	+	prkB	SO0878	0.55	+1.0
908,473	-	prkB	SO0878	0.56	-1.2
908,473	-	prkB	SO0878	0.56	+1.4
908,473	-	prkB	SO0878	0.56	+0.6
908,557	+	prkB	SO0878	0.65	-1.5
908,623	+	prkB	SO0878	0.73	-0.4
908,631	-	prkB	SO0878	0.74	+2.1
908,641	-	prkB	SO0878	0.75	+1.3
908,760	-	prkB	SO0878	0.88	-0.5
908,762	+	prkB	SO0878	0.89	-0.8
908,822	+				+0.2
908,830	-				-1.4
908,872	+				-0.3
909,142	-		SO0879	0.79	-1.2
909,308	+		SO0880	0.11	+0.6
909,412	+		SO0880	0.21	+1.7
909,592	+		SO0880	0.40	-1.8
909,703	+		SO0880	0.51	-1.2
909,799	-		SO0880	0.61	-1.5
909,826	+		SO0880	0.63	+1.0
909,826	+		SO0880	0.63	-0.0
909,834	-		SO0880	0.64	+0.0
909,892	+		SO0880	0.70	-0.8
909,900	-		SO0880	0.71	+1.1
909,910	-		SO0880	0.72	+0.2
909,947	+		SO0880	0.76	-2.1
909,955	+		SO0880	0.76	+1.1
909,969	+		SO0880	0.78	-1.4
910,083	-		SO0880	0.89	+0.4
910,083	-		SO0880	0.89	-0.0
910,083	-		SO0880	0.89	-0.0
910,109	-				-0.2
910,166	-				+1.1