Strain Fitness in Shewanella oneidensis MR-1 around SO0809

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
820,187	-	hpt-1	SO0807	0.66	-1.3
820,318	-	hpt-1	SO0807	0.89	+0.3
820,336	+				-0.8
820,337	+				+0.1
820,344	-				-0.6
820,344	-				-0.2
820,449	+				+0.9
820,486	+				-0.7
820,487	+				-1.4
820,495	-				-0.2
820,893	-		SO0808	0.48	+0.1
820,896	+		SO0808	0.49	+0.3
820,931	-		SO0808	0.61	-0.1
820,935	-		SO0808	0.62	-2.1
821,045	+				-0.5
821,175	-				-1.4
821,247	+	azu	SO0809	0.20	-1.3
821,264	-	azu	SO0809	0.24	+0.2
821,395	+	azu	SO0809	0.51	-2.6
821,400	+	azu	SO0809	0.52	+0.2
821,400	+	azu	SO0809	0.52	-0.2
821,434	+	azu	SO0809	0.59	-1.2
821,438	+	azu	SO0809	0.60	-0.7
821,478	+	azu	SO0809	0.69	-0.5
821,506	+	azu	SO0809	0.74	-0.1
821,524	-	azu	SO0809	0.78	-0.9
821,567	+	azu	SO0809	0.87	+0.2
821,582	+				-2.1
821,585	-				-1.1
821,590	-				-0.1
821,592	+				-0.2
821,636	+				+0.2
821,644	-				+0.9
821,644	-				+0.7
821,770	+				-0.5
821,790	+				+0.7
821,941	+	rbsK	SO0810	0.16	-1.2
822,107	+	rbsK	SO0810	0.34	-0.2
822,209	+	rbsK	SO0810	0.45	-0.3
822,298	+	rbsK	SO0810	0.55	-1.3
822,310	+	rbsK	SO0810	0.56	-0.7
822,508	+	rbsK	SO0810	0.78	-0.4
822,516	-	rbsK	SO0810	0.79	+0.5
822,534	-	rbsK	SO0810	0.81	+1.8
822,552	+	rbsK	SO0810	0.83	-0.6
822,600	+	rbsK	SO0810	0.88	-0.9
822,608	-	rbsK	SO0810	0.89	-0.3