Strain Fitness in Shewanella oneidensis MR-1 around SO0605

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
630,402	-	hflX	SO0604	0.27	+2.7
630,502	+	hflX	SO0604	0.34	-1.1
630,697	+	hflX	SO0604	0.49	-1.2
630,697	+	hflX	SO0604	0.49	+0.1
630,697	+	hflX	SO0604	0.49	+0.5
630,774	+	hflX	SO0604	0.55	-3.0
630,803	+	hflX	SO0604	0.57	-1.2
631,050	+	hflX	SO0604	0.76	+2.4
631,050	+	hflX	SO0604	0.76	-0.6
631,056	+	hflX	SO0604	0.77	-1.4
631,056	+	hflX	SO0604	0.77	-1.5
631,080	+	hflX	SO0604	0.79	-1.6
631,247	+				-2.6
631,299	+				-0.5
631,311	+				-1.1
631,389	+				-2.3
631,550	+	hflK	SO0605	0.13	-0.3
631,550	+	hflK	SO0605	0.13	+1.1
632,028	+	hflK	SO0605	0.55	-1.6
632,119	+	hflK	SO0605	0.63	-0.7
632,247	+	hflK	SO0605	0.74	-0.3
632,254	+	hflK	SO0605	0.75	-1.0
632,259	+	hflK	SO0605	0.75	-1.0
632,316	+	hflK	SO0605	0.80	+0.4
632,406	+	hflK	SO0605	0.88	-1.6
632,430	+				+0.7
632,430	+				-2.3
632,430	+				-1.4
632,590	+				-1.1
632,744	-	hflC	SO0606	0.22	+1.7
632,765	+	hflC	SO0606	0.25	+1.1
632,903	+	hflC	SO0606	0.40	+0.4
633,052	+	hflC	SO0606	0.57	-1.5
633,231	+	hflC	SO0606	0.77	-0.8
633,332	+	hflC	SO0606	0.88	-1.0