Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS12465

Experiment: L-Glutamine (C)(N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Glutamine (C)(N); with MOPS
2,787,923	+		PFLU_RS30745	0.85	-1.1
2,787,923	+		PFLU_RS30745	0.85	-0.3
2,787,923	+		PFLU_RS30745	0.85	-0.9
2,787,923	+		PFLU_RS30745	0.85	+2.7
2,787,923	+		PFLU_RS30745	0.85	-1.7
2,787,923	+		PFLU_RS30745	0.85	-2.0
2,787,927	+		PFLU_RS30745	0.86	+0.3
2,787,927	+		PFLU_RS30745	0.86	-1.3
2,787,927	+		PFLU_RS30745	0.86	+1.5
2,787,927	+		PFLU_RS30745	0.86	+1.5
2,787,927	+		PFLU_RS30745	0.86	+1.6
2,787,927	+		PFLU_RS30745	0.86	+1.9
2,787,927	+		PFLU_RS30745	0.86	-1.6
2,787,927	+		PFLU_RS30745	0.86	-1.7
2,787,927	+		PFLU_RS30745	0.86	-1.7
2,787,927	+		PFLU_RS30745	0.86	+0.9
2,787,927	+		PFLU_RS30745	0.86	-2.5
2,787,931	+		PFLU_RS30745	0.87	-1.9
2,787,931	+		PFLU_RS30745	0.87	+1.0
2,787,931	+		PFLU_RS30745	0.87	+1.6
2,787,931	+		PFLU_RS30745	0.87	-3.1
2,787,931	+		PFLU_RS30745	0.87	-0.3
2,787,931	+		PFLU_RS30745	0.87	+2.5
2,787,931	+		PFLU_RS30745	0.87	+1.2
2,787,931	+		PFLU_RS30745	0.87	-0.7
2,787,948	+				-2.8
2,787,948	+				+0.3
2,787,948	+				+0.5
2,787,948	+				-0.1
2,787,949	-				+1.3
2,787,949	-				+3.1
2,787,963	+				+0.9
2,787,963	+				-1.6
2,787,963	+				-1.9
2,787,963	+				+0.4
2,787,963	+				+3.0
2,787,963	+				-2.3
2,787,964	-				-1.6
2,787,964	-				+1.3
2,787,964	-				-1.3
2,787,964	-				-2.4
2,787,964	-				-2.0
2,787,964	-				+1.1
2,788,012	-				+0.5
2,788,014	+				+2.0
2,788,014	+				-1.3
2,788,014	+				+0.5
2,788,014	+				-0.8
2,788,014	+				-0.7
2,788,015	-				+1.9
2,788,065	+				+0.2
2,788,066	-				+0.3
2,788,134	+		PFLU_RS12460	0.14	-0.1
2,788,134	+		PFLU_RS12460	0.14	+0.7
2,788,135	-		PFLU_RS12460	0.14	-2.3
2,788,135	-		PFLU_RS12460	0.14	-1.8
2,788,135	-		PFLU_RS12460	0.14	+1.9
2,788,188	+		PFLU_RS12460	0.20	+0.5
2,788,188	+		PFLU_RS12460	0.20	+3.3
2,788,188	+		PFLU_RS12460	0.20	+1.8
2,788,188	+		PFLU_RS12460	0.20	+1.1
2,788,188	+		PFLU_RS12460	0.20	-0.9
2,788,189	-		PFLU_RS12460	0.20	-0.5
2,788,189	-		PFLU_RS12460	0.20	+0.7
2,788,189	-		PFLU_RS12460	0.20	+0.9
2,788,189	-		PFLU_RS12460	0.20	+2.3
2,788,189	-		PFLU_RS12460	0.20	-2.5
2,788,222	-		PFLU_RS12460	0.24	-0.2
2,788,222	-		PFLU_RS12460	0.24	-1.1
2,788,242	+		PFLU_RS12460	0.27	-1.0
2,788,242	+		PFLU_RS12460	0.27	+1.0
2,788,242	+		PFLU_RS12460	0.27	-0.9
2,788,242	+		PFLU_RS12460	0.27	+0.6
2,788,242	+		PFLU_RS12460	0.27	-1.1
2,788,242	+		PFLU_RS12460	0.27	-1.8
2,788,242	+		PFLU_RS12460	0.27	+0.7
2,788,242	+		PFLU_RS12460	0.27	-1.6
2,788,242	+		PFLU_RS12460	0.27	+1.0
2,788,242	+		PFLU_RS12460	0.27	-2.2
2,788,242	+		PFLU_RS12460	0.27	-0.6
2,788,242	+		PFLU_RS12460	0.27	-1.3
2,788,242	+		PFLU_RS12460	0.27	-1.6
2,788,242	+		PFLU_RS12460	0.27	+0.5
2,788,242	+		PFLU_RS12460	0.27	-0.7
2,788,243	-		PFLU_RS12460	0.27	-1.3
2,788,243	-		PFLU_RS12460	0.27	+2.9
2,788,243	-		PFLU_RS12460	0.27	+0.4
2,788,243	-		PFLU_RS12460	0.27	-0.1
2,788,243	-		PFLU_RS12460	0.27	-1.1
2,788,243	-		PFLU_RS12460	0.27	+1.9
2,788,243	-		PFLU_RS12460	0.27	-2.6
2,788,243	-		PFLU_RS12460	0.27	+0.6
2,788,243	-		PFLU_RS12460	0.27	+0.5
2,788,243	-		PFLU_RS12460	0.27	+0.6
2,788,243	-		PFLU_RS12460	0.27	-0.9
2,788,287	+		PFLU_RS12460	0.32	-2.3
2,788,287	+		PFLU_RS12460	0.32	-0.1
2,788,287	+		PFLU_RS12460	0.32	+1.9
2,788,288	-		PFLU_RS12460	0.32	+2.8
2,788,288	-		PFLU_RS12460	0.32	+1.0
2,788,288	-		PFLU_RS12460	0.32	-2.2
2,788,288	-		PFLU_RS12460	0.32	+0.5
2,788,294	-		PFLU_RS12460	0.33	-1.3
2,788,311	+		PFLU_RS12460	0.35	+0.5
2,788,311	+		PFLU_RS12460	0.35	-1.8
2,788,311	+		PFLU_RS12460	0.35	+0.6
2,788,311	+		PFLU_RS12460	0.35	-0.7
2,788,311	+		PFLU_RS12460	0.35	+0.1
2,788,311	+		PFLU_RS12460	0.35	+1.4
2,788,311	+		PFLU_RS12460	0.35	+2.1
2,788,311	+		PFLU_RS12460	0.35	-1.3
2,788,311	+		PFLU_RS12460	0.35	+1.3
2,788,311	+		PFLU_RS12460	0.35	+1.2
2,788,311	+		PFLU_RS12460	0.35	+1.1
2,788,312	-		PFLU_RS12460	0.35	+0.1
2,788,312	-		PFLU_RS12460	0.35	-0.1
2,788,312	-		PFLU_RS12460	0.35	-0.4
2,788,312	-		PFLU_RS12460	0.35	+1.7
2,788,312	-		PFLU_RS12460	0.35	-2.8
2,788,312	-		PFLU_RS12460	0.35	+1.9
2,788,338	+		PFLU_RS12460	0.38	+1.0
2,788,379	-		PFLU_RS12460	0.43	-1.4
2,788,464	+		PFLU_RS12460	0.52	+1.0
2,788,465	-		PFLU_RS12460	0.52	-1.3
2,788,465	-		PFLU_RS12460	0.52	-0.9
2,788,465	-		PFLU_RS12460	0.52	-0.1
2,788,599	+		PFLU_RS12460	0.68	-2.8
2,788,599	+		PFLU_RS12460	0.68	+1.9
2,788,599	+		PFLU_RS12460	0.68	+3.2
2,788,599	+		PFLU_RS12460	0.68	+1.2
2,788,599	+		PFLU_RS12460	0.68	-0.9
2,788,599	+		PFLU_RS12460	0.68	+1.5
2,788,599	+		PFLU_RS12460	0.68	-0.9
2,788,599	+		PFLU_RS12460	0.68	-1.6
2,788,599	+		PFLU_RS12460	0.68	-0.1
2,788,599	+		PFLU_RS12460	0.68	-0.2
2,788,599	+		PFLU_RS12460	0.68	-1.1
2,788,600	-		PFLU_RS12460	0.68	-0.1
2,788,600	-		PFLU_RS12460	0.68	-0.4
2,788,600	-		PFLU_RS12460	0.68	-2.2
2,788,600	-		PFLU_RS12460	0.68	-0.6
2,788,600	-		PFLU_RS12460	0.68	-1.4
2,788,600	-		PFLU_RS12460	0.68	-0.7
2,788,600	-		PFLU_RS12460	0.68	-1.8
2,788,600	-		PFLU_RS12460	0.68	-0.4
2,788,600	-		PFLU_RS12460	0.68	+0.9
2,788,745	+		PFLU_RS12460	0.85	-0.9
2,788,745	+		PFLU_RS12460	0.85	-0.3
2,788,746	-		PFLU_RS12460	0.85	-0.8
2,788,778	+		PFLU_RS12460	0.89	+2.1
2,788,778	+		PFLU_RS12460	0.89	-2.4
2,788,778	+		PFLU_RS12460	0.89	-1.3
2,788,778	+		PFLU_RS12460	0.89	-2.4
2,788,909	+				-0.3
2,788,910	-				-0.1
2,788,910	-				-1.8
2,789,041	+		PFLU_RS12465	0.10	-0.9
2,789,041	+		PFLU_RS12465	0.10	+1.5
2,789,041	+		PFLU_RS12465	0.10	-0.9
2,789,042	-		PFLU_RS12465	0.11	+1.4
2,789,042	-		PFLU_RS12465	0.11	+0.2
2,789,042	-		PFLU_RS12465	0.11	+2.0
2,789,042	-		PFLU_RS12465	0.11	-1.9
2,789,042	-		PFLU_RS12465	0.11	+3.5
2,789,335	+		PFLU_RS12465	0.34	-0.1
2,789,335	+		PFLU_RS12465	0.34	+0.3
2,789,335	+		PFLU_RS12465	0.34	+0.5
2,789,335	+		PFLU_RS12465	0.34	-0.1
2,789,335	+		PFLU_RS12465	0.34	-1.3
2,789,335	+		PFLU_RS12465	0.34	+2.5
2,789,335	+		PFLU_RS12465	0.34	+1.8
2,789,335	+		PFLU_RS12465	0.34	-1.1
2,789,335	+		PFLU_RS12465	0.34	-1.7
2,789,335	+		PFLU_RS12465	0.34	+0.5
2,789,335	+		PFLU_RS12465	0.34	-0.0
2,789,335	+		PFLU_RS12465	0.34	+1.5
2,789,335	+		PFLU_RS12465	0.34	+2.0
2,789,335	+		PFLU_RS12465	0.34	+1.0
2,789,336	-		PFLU_RS12465	0.34	+2.2
2,789,336	-		PFLU_RS12465	0.34	-1.6
2,789,336	-		PFLU_RS12465	0.34	+2.4
2,789,336	-		PFLU_RS12465	0.34	-0.1
2,789,336	-		PFLU_RS12465	0.34	-0.3
2,789,336	-		PFLU_RS12465	0.34	-2.9
2,789,482	+		PFLU_RS12465	0.45	-2.4
2,789,482	+		PFLU_RS12465	0.45	-0.9
2,789,483	-		PFLU_RS12465	0.45	-0.7
2,789,483	-		PFLU_RS12465	0.45	+2.2
2,789,483	-		PFLU_RS12465	0.45	+2.4
2,789,483	-		PFLU_RS12465	0.45	-0.7
2,789,615	+		PFLU_RS12465	0.56	+3.5
2,789,740	+		PFLU_RS12465	0.65	+1.7
2,789,740	+		PFLU_RS12465	0.65	-1.4
2,789,740	+		PFLU_RS12465	0.65	-2.4
2,789,740	+		PFLU_RS12465	0.65	+0.1
2,789,741	-		PFLU_RS12465	0.65	+0.3
2,789,741	-		PFLU_RS12465	0.65	+0.9
2,789,741	-		PFLU_RS12465	0.65	-0.9
2,789,741	-		PFLU_RS12465	0.65	-0.7
2,789,741	-		PFLU_RS12465	0.65	-0.4
2,789,741	-		PFLU_RS12465	0.65	+1.2
2,789,781	+		PFLU_RS12465	0.69	+2.5
2,789,782	-		PFLU_RS12465	0.69	-1.4
2,789,798	-		PFLU_RS12465	0.70	+0.9
2,789,884	-		PFLU_RS12465	0.77	-1.8
2,790,028	+		PFLU_RS12465	0.88	-0.1
2,790,028	+		PFLU_RS12465	0.88	+1.8
2,790,029	-		PFLU_RS12465	0.88	+1.0
2,790,141	+				-1.3
2,790,141	+				-2.4
2,790,141	+				+1.9
2,790,142	-				-0.4
2,790,164	+				+2.0
2,790,165	-				+0.5
2,790,165	-				-0.1
2,790,231	+				+1.0
2,790,231	+				-2.2
2,790,327	+				-1.9
2,790,327	+				+0.7
2,790,328	-				-2.0
2,790,421	+		PFLU_RS12470	0.17	+1.3
2,790,422	-		PFLU_RS12470	0.17	-2.5
2,790,422	-		PFLU_RS12470	0.17	+0.4
2,790,422	-		PFLU_RS12470	0.17	-1.1
2,790,481	+		PFLU_RS12470	0.21	-0.2
2,790,481	+		PFLU_RS12470	0.21	+1.4
2,790,643	+		PFLU_RS12470	0.33	+1.4
2,790,770	+		PFLU_RS12470	0.42	+2.7
2,790,947	+		PFLU_RS12470	0.55	+1.4
2,790,947	+		PFLU_RS12470	0.55	+1.6
2,790,947	+		PFLU_RS12470	0.55	-2.7
2,790,947	+		PFLU_RS12470	0.55	-2.8
2,790,948	-		PFLU_RS12470	0.56	+1.7
2,790,948	-		PFLU_RS12470	0.56	+0.9
2,790,958	+		PFLU_RS12470	0.56	+0.9
2,790,958	+		PFLU_RS12470	0.56	+1.3
2,790,958	+		PFLU_RS12470	0.56	+1.5
2,790,958	+		PFLU_RS12470	0.56	-0.3
2,790,958	+		PFLU_RS12470	0.56	+0.4
2,790,958	+		PFLU_RS12470	0.56	-0.1
2,790,958	+		PFLU_RS12470	0.56	-2.0
2,790,958	+		PFLU_RS12470	0.56	+0.7
2,790,958	+		PFLU_RS12470	0.56	-1.3
2,790,958	+		PFLU_RS12470	0.56	+2.6
2,790,958	+		PFLU_RS12470	0.56	+1.5
2,790,958	+		PFLU_RS12470	0.56	-0.7
2,790,959	-		PFLU_RS12470	0.56	-1.9
2,790,959	-		PFLU_RS12470	0.56	-1.7
2,790,959	-		PFLU_RS12470	0.56	-2.3
2,790,959	-		PFLU_RS12470	0.56	+1.7
2,790,959	-		PFLU_RS12470	0.56	-1.4
2,790,959	-		PFLU_RS12470	0.56	+1.9
2,790,959	-		PFLU_RS12470	0.56	+1.1
2,790,959	-		PFLU_RS12470	0.56	-0.9
2,790,959	-		PFLU_RS12470	0.56	+0.9
2,790,959	-		PFLU_RS12470	0.56	-2.7
2,791,148	+		PFLU_RS12470	0.70	-0.9
2,791,149	-		PFLU_RS12470	0.70	+2.0
2,791,156	+		PFLU_RS12470	0.71	-2.6
2,791,157	-		PFLU_RS12470	0.71	+0.3