Strain Fitness in Shewanella oneidensis MR-1 around SO4537.2

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
4,731,178	+		SO_4538	0.33	-0.2
4,731,216	+		SO_4538	0.36	-0.2
4,731,254	-		SO_4538	0.39	-0.8
4,731,281	+		SO_4538	0.40	+0.6
4,731,313	-		SO_4538	0.43	+0.4
4,731,328	-		SO_4538	0.44	-2.1
4,731,339	-		SO_4538	0.44	-0.9
4,731,385	+		SO_4538	0.47	-1.0
4,731,386	-		SO_4538	0.48	-0.2
4,731,386	-		SO_4538	0.48	-0.5
4,731,404	-		SO_4538	0.49	+0.7
4,731,443	-		SO_4538	0.51	+0.8
4,731,456	+		SO_4538	0.52	-1.5
4,731,456	+		SO_4538	0.52	+0.5
4,731,494	+		SO_4538	0.55	+1.2
4,731,494	+		SO_4538	0.55	-1.3
4,731,538	+		SO_4538	0.58	-0.3
4,731,602	+		SO_4538	0.62	-1.3
4,731,636	+		SO_4538	0.64	+2.4
4,731,659	+		SO_4538	0.66	-0.3
4,731,830	+		SO_4538	0.78	-1.1
4,731,935	-		SO_4538	0.85	+1.4
4,732,019	+				-0.3
4,732,019	+				-0.9
4,732,039	-				+1.1
4,732,119	+				-1.5
4,732,221	+				-2.3
4,732,234	+				+0.8
4,732,409	+		SO4537.2	0.19	-1.2
4,732,418	+		SO4537.2	0.20	-0.1
4,732,680	-		SO4537.2	0.39	+0.5
4,732,682	+		SO4537.2	0.39	+1.6
4,732,722	+		SO4537.2	0.42	-1.9
4,732,729	+		SO4537.2	0.43	+0.7
4,732,730	-		SO4537.2	0.43	-0.7
4,732,750	+		SO4537.2	0.44	-0.1
4,732,847	+		SO4537.2	0.52	+0.5
4,732,850	+		SO4537.2	0.52	-1.5
4,732,863	-		SO4537.2	0.53	-0.1
4,732,863	-		SO4537.2	0.53	-0.7
4,732,863	-		SO4537.2	0.53	-0.7
4,732,870	+		SO4537.2	0.53	+0.7
4,732,890	+		SO4537.2	0.55	-1.0
4,732,948	+		SO4537.2	0.59	-0.3
4,732,948	+		SO4537.2	0.59	-1.1
4,732,948	+		SO4537.2	0.59	+0.7
4,732,948	+		SO4537.2	0.59	-0.2
4,732,948	+		SO4537.2	0.59	+1.0
4,732,950	-		SO4537.2	0.59	+0.3
4,732,956	-		SO4537.2	0.60	-1.0
4,732,956	-		SO4537.2	0.60	+0.1
4,732,956	-		SO4537.2	0.60	+0.3
4,733,101	+		SO4537.2	0.71	-0.1
4,733,173	-		SO4537.2	0.76	-2.6
4,733,222	+		SO4537.2	0.80	-0.1
4,733,297	-		SO4537.2	0.86	-1.6
4,733,350	+		SO4537.2	0.89	+2.6
4,733,380	+				-0.3
4,733,398	+				-0.4
4,733,398	-				+1.2
4,733,416	-				+0.1
4,733,426	+				-1.4
4,733,429	-				+0.6
4,733,436	-				+1.6
4,733,463	+				-1.6
4,733,463	+				+1.0
4,733,463	+				+1.1
4,733,463	+				-0.5
4,733,463	+				-1.1
4,733,471	-				+0.7
4,733,471	-				+0.1
4,733,471	-				-1.0
4,733,471	-				-0.4
4,733,616	-				-0.2
4,733,651	-				-0.4
4,733,944	-				+0.5
4,734,029	+				-0.9
4,734,037	-				-1.3
4,734,037	-				-2.1
4,734,100	-				-0.5
4,734,148	-				+0.2
4,734,150	-				-0.5
4,734,170	-				+1.6
4,734,170	-				+0.7
4,734,210	+				+0.7
4,734,223	-				-2.7
4,734,223	-				-0.3
4,734,260	+				-0.5
4,734,272	+				-1.2
4,734,279	+				+0.1
4,734,285	-				+0.2
4,734,334	-				+1.1
4,734,336	+				-3.2
4,734,344	-				+1.3
4,734,400	+				+0.1
4,734,400	+				+0.3
4,734,408	-				+2.1
4,734,408	-				-0.9
4,734,469	-				-0.8