Strain Fitness in Shewanella oneidensis MR-1 around SOA0014

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
11,332	+				-0.5
11,391	-	umuD	SOA0013	0.14	-0.2
11,452	-	umuD	SOA0013	0.29	+0.1
11,471	-	umuD	SOA0013	0.34	-0.7
11,585	-	umuD	SOA0013	0.62	+0.3
11,654	+	umuD	SOA0013	0.79	-1.3
11,660	+	umuD	SOA0013	0.80	-0.3
11,668	-	umuD	SOA0013	0.82	-2.4
11,678	-	umuD	SOA0013	0.85	+0.9
11,682	-	umuD	SOA0013	0.86	+0.6
11,913	+				-1.3
12,111	+				-0.4
12,111	+				-0.9
12,113	+				-0.9
12,119	-				+1.1
12,120	-				+0.9
12,120	-				+0.8
12,204	-				-0.0
12,293	+				+0.5
12,301	-				-0.9
12,301	-				-0.5
12,303	+				-1.4
12,330	-				+0.3
12,359	-		SOA0014	0.28	-3.8
12,361	+		SOA0014	0.30	-1.4
12,561	+				-0.4
12,569	-				+1.5
12,592	+				+0.4
12,686	+				+0.3
12,686	+				-0.2
12,904	+				+0.2
12,912	-				-0.8