Strain Fitness in Shewanella oneidensis MR-1 around SO4183

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
4,354,676	-		SO_4181	0.69	+2.2
4,354,723	+		SO_4181	0.75	-1.4
4,354,723	+		SO_4181	0.75	-2.9
4,354,840	+		SO_4181	0.87	-2.5
4,354,912	+				-0.7
4,354,982	-				-1.2
4,355,022	+				-1.5
4,355,108	-		SO4182	0.17	-1.1
4,355,113	+		SO4182	0.18	+0.0
4,355,169	+		SO4182	0.28	+0.2
4,355,171	-		SO4182	0.28	+0.8
4,355,209	+		SO4182	0.35	-0.5
4,355,214	+		SO4182	0.36	+0.0
4,355,214	+		SO4182	0.36	+1.1
4,355,222	-		SO4182	0.37	-1.0
4,355,275	-		SO4182	0.46	+0.5
4,355,291	-		SO4182	0.49	-0.6
4,355,334	-		SO4182	0.56	+1.3
4,355,372	-		SO4182	0.63	-0.7
4,355,432	+		SO4182	0.73	-0.1
4,355,526	-		SO4182	0.90	+1.9
4,355,526	-		SO4182	0.90	-0.9
4,355,526	-		SO4182	0.90	-3.3
4,355,531	+				-0.5
4,355,591	+				+0.7
4,355,610	-				-0.0
4,356,826	+				+0.0
4,356,826	+				-0.0
4,356,826	+				+1.0
4,356,826	+				-0.9
4,356,949	+				-0.8
4,356,950	+				-1.6
4,356,957	-				+1.8
4,356,966	+				-0.8
4,356,977	+		SO4185	0.11	-0.2
4,356,977	+		SO4185	0.11	+1.9
4,356,985	-		SO4185	0.14	+1.9
4,357,052	-		SO4185	0.44	+1.0
4,357,110	-		SO4185	0.70	-1.1
4,357,183	-				+0.6
4,357,261	-		SO4186	0.39	+0.9
4,357,280	+		SO4186	0.53	-1.3
4,357,281	+		SO4186	0.54	-1.6
4,357,281	+		SO4186	0.54	+2.2
4,357,286	+		SO4186	0.58	-0.1
4,357,288	-		SO4186	0.60	+1.2
4,357,325	-		SO4186	0.88	-1.3