Strain Fitness in Shewanella oneidensis MR-1 around SO3470

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
3,615,469	-		SO3470	0.17	-1.4
3,615,484	-		SO3470	0.21	-1.0
3,615,594	+		SO3470	0.45	+1.7
3,615,621	-		SO3470	0.51	-0.3
3,615,861	+				-0.1
3,615,869	-				+0.1
3,615,869	-				-0.1
3,616,037	-				+1.2
3,616,067	+				-1.5
3,616,127	+				+2.7
3,616,269	-	glyA	SO3471	0.19	-0.8
3,616,279	-	glyA	SO3471	0.20	-0.7
3,616,279	-	glyA	SO3471	0.20	-2.4
3,616,303	+	glyA	SO3471	0.22	-1.2
3,616,311	-	glyA	SO3471	0.22	+0.7
3,616,311	-	glyA	SO3471	0.22	-2.0
3,616,450	-	glyA	SO3471	0.33	+0.4
3,616,595	+	glyA	SO3471	0.45	+0.2
3,616,638	+	glyA	SO3471	0.48	+0.4
3,616,729	+	glyA	SO3471	0.56	+0.9