Strain Fitness in Shewanella oneidensis MR-1 around SO2829

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
2,946,513	-				+0.9
2,946,850	+				+0.2
2,946,858	-				+1.9
2,946,858	-				+0.5
2,946,928	+				-0.3
2,946,988	+		SO2827	0.20	+1.3
2,947,236	+		SO2827	0.87	+0.1
2,947,258	-				+0.1
2,947,334	-		SO2828	0.25	-1.2
2,947,482	+				+2.6
2,947,502	-				+0.3
2,947,618	-		SO2829	0.27	+0.3
2,947,671	-		SO2829	0.39	+0.4
2,948,000	+				+0.6
2,948,008	-				-1.0
2,948,094	-				+0.7
2,948,266	-		SO2830	0.27	-0.0
2,948,365	+		SO2830	0.37	+1.8
2,948,375	+		SO2830	0.38	-1.0
2,948,375	+		SO2830	0.38	-0.3
2,948,508	+		SO2830	0.53	-1.8
2,948,539	+		SO2830	0.56	+0.2
2,948,827	-		SO2830	0.86	+0.4
2,948,920	+				-1.2