Strain Fitness in Shewanella oneidensis MR-1 around SO2617

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
2,751,948	-	pabC	SO2615	0.72	-1.3
2,752,526	-	dcd	SO2616	0.60	+1.5
2,753,076	-	udk	SO2617	0.45	+0.3
2,753,143	+	udk	SO2617	0.56	+3.0
2,753,194	-	udk	SO2617	0.64	-1.4
2,753,221	-	udk	SO2617	0.68	-1.5
2,753,436	-				+0.2
2,753,623	-		SO2618	0.17	-1.8
2,753,623	-		SO2618	0.17	-1.8
2,753,744	-		SO2618	0.28	-0.9
2,753,907	-		SO2618	0.42	-0.5
2,753,984	-		SO2618	0.49	-1.7
2,754,065	+		SO2618	0.56	+2.0
2,754,157	+		SO2618	0.65	+1.0