Strain Fitness in Shewanella oneidensis MR-1 around SO2352

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
2,459,136	-		SO2351	0.45	-0.7
2,459,141	+		SO2351	0.46	+3.1
2,459,162	-		SO2351	0.48	-1.3
2,459,182	+		SO2351	0.50	-1.3
2,459,190	-		SO2351	0.51	+0.3
2,459,310	-		SO2351	0.64	-0.3
2,459,357	+		SO2351	0.69	+0.9
2,459,365	-		SO2351	0.70	+0.6
2,459,485	+		SO2351	0.83	+1.1
2,459,493	-		SO2351	0.84	+0.1
2,459,773	+				-0.3
2,459,809	+				-0.2
2,459,913	+				-0.6
2,459,921	-				-0.2
2,459,963	+				+0.8
2,460,207	+		SO2352	0.30	-0.4
2,460,238	+		SO2352	0.34	+0.7
2,460,318	+		SO2352	0.45	+1.1
2,460,492	-		SO2352	0.67	+1.1
2,460,555	+		SO2352	0.76	-0.2
2,460,563	-		SO2352	0.77	+1.0
2,460,563	-		SO2352	0.77	+2.0
2,460,616	+		SO2352	0.84	-0.2
2,460,828	+		SO2353	0.15	+0.6
2,460,828	+		SO2353	0.15	-0.0
2,460,828	+		SO2353	0.15	-0.4
2,460,828	+		SO2353	0.15	+1.8
2,460,828	+		SO2353	0.15	+0.8
2,460,923	-		SO2353	0.30	+2.1
2,460,931	+		SO2353	0.32	-1.8
2,460,957	-		SO2353	0.36	+0.1
2,460,957	-		SO2353	0.36	-1.1
2,461,040	+		SO2353	0.49	-0.8
2,461,048	-		SO2353	0.50	-1.3
2,461,146	+		SO2353	0.66	+0.1
2,461,270	+		SO2353	0.86	+1.5
2,461,298	+				-0.2
2,461,437	+				-0.4