Strain Fitness in Shewanella oneidensis MR-1 around SO2253

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
2,365,527	+		SO2251	0.34	-0.5
2,365,744	+		SO2251	0.74	-0.2
2,365,754	+		SO2251	0.76	+0.3
2,365,875	-				+0.1
2,365,875	-				-0.7
2,365,885	-				-1.1
2,365,909	-				+1.2
2,366,024	+				-0.3
2,366,303	-				+0.3
2,366,407	+				-0.4
2,366,422	+				-0.0
2,366,489	+		SO2253	0.12	+0.6
2,366,494	+		SO2253	0.14	+1.5
2,366,661	+		SO2253	0.75	-0.6
2,366,762	+				-0.2
2,367,220	-		SO2254	0.37	-0.6
2,367,303	+		SO2254	0.45	-0.2
2,367,311	-		SO2254	0.46	+1.2
2,367,311	-		SO2254	0.46	-0.9
2,367,330	+		SO2254	0.48	+0.2
2,367,496	+		SO2254	0.65	+1.9