Strain Fitness in Shewanella oneidensis MR-1 around SO2245

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
2,359,641	+		SO2244	0.48	+0.7
2,359,942	-		SO2244	0.76	+0.6
2,359,987	+		SO2244	0.81	-1.3
2,360,027	+		SO2244	0.84	+0.3
2,360,091	+				+2.1
2,360,141	+				-0.3
2,360,141	+				+1.9
2,360,149	-				+1.1
2,360,195	+				+0.8
2,360,342	+				+0.8
2,360,884	-	dnaQ-1	SO2245	0.46	-0.1
2,361,161	-	dnaQ-1	SO2245	0.89	-2.4
2,361,351	+				+0.3
2,361,471	+				-0.7
2,361,471	+				+1.6
2,361,479	-				+1.0
2,361,479	-				+0.8
2,361,479	-				+0.9
2,361,479	-				+1.9
2,361,502	+				-0.2
2,361,665	+				+0.8
2,361,680	-				-1.1
2,361,854	-		SO2247	0.30	-0.3
2,361,856	+		SO2247	0.30	-0.1
2,361,864	-		SO2247	0.31	-0.8
2,361,875	+		SO2247	0.33	-0.2
2,362,179	+		SO2247	0.74	-0.6